5 items (Penicillium oxalicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDE_00128	CULLIN_2 domain-containing protein; Belongs to the cullin family. (764 aa)
	PDE_02249	Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
	PDE_02289	RING-type domain-containing protein. (118 aa)
	PDE_03202	Uncharacterized protein. (668 aa)
	PDE_08171	Uncharacterized protein. (1029 aa)

Your Current Organism:

Penicillium oxalicum

NCBI taxonomy Id: 933388
Other names: P. oxalicum 114-2, Penicillium oxalicum 114-2

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PDE_00128	PDE_02249	S7Z946	S7ZF79	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein; Belongs to the SKP1 family.	0.996
PDE_00128	PDE_02289	S7Z946	S7ZFE3	CULLIN_2 domain-containing protein; Belongs to the cullin family.	RING-type domain-containing protein.	0.994
PDE_00128	PDE_03202	S7Z946	S7ZHT9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.978
PDE_00128	PDE_08171	S7Z946	S7ZS03	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.991
PDE_02249	PDE_00128	S7ZF79	S7Z946	Uncharacterized protein; Belongs to the SKP1 family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.996
PDE_02249	PDE_02289	S7ZF79	S7ZFE3	Uncharacterized protein; Belongs to the SKP1 family.	RING-type domain-containing protein.	0.993
PDE_02249	PDE_03202	S7ZF79	S7ZHT9	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.979
PDE_02249	PDE_08171	S7ZF79	S7ZS03	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.998
PDE_02289	PDE_00128	S7ZFE3	S7Z946	RING-type domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.994
PDE_02289	PDE_02249	S7ZFE3	S7ZF79	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.993
PDE_02289	PDE_03202	S7ZFE3	S7ZHT9	RING-type domain-containing protein.	Uncharacterized protein.	0.991
PDE_02289	PDE_08171	S7ZFE3	S7ZS03	RING-type domain-containing protein.	Uncharacterized protein.	0.995
PDE_03202	PDE_00128	S7ZHT9	S7Z946	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.978
PDE_03202	PDE_02249	S7ZHT9	S7ZF79	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.979
PDE_03202	PDE_02289	S7ZHT9	S7ZFE3	Uncharacterized protein.	RING-type domain-containing protein.	0.991
PDE_03202	PDE_08171	S7ZHT9	S7ZS03	Uncharacterized protein.	Uncharacterized protein.	0.896
PDE_08171	PDE_00128	S7ZS03	S7Z946	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.991
PDE_08171	PDE_02249	S7ZS03	S7ZF79	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.998
PDE_08171	PDE_02289	S7ZS03	S7ZFE3	Uncharacterized protein.	RING-type domain-containing protein.	0.995
PDE_08171	PDE_03202	S7ZS03	S7ZHT9	Uncharacterized protein.	Uncharacterized protein.	0.896