41 items (Penicillium oxalicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDE_07841	MRP-L46 domain-containing protein. (340 aa)
	PDE_08527	Ribosomal_L2_C domain-containing protein. (404 aa)
	PDE_08757	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (251 aa)
	PDE_08626	Uncharacterized protein. (185 aa)
	PDE_07326	L51_S25_CI-B8 domain-containing protein. (137 aa)
	PDE_07341	Uncharacterized protein. (336 aa)
	PDE_07396	Uncharacterized protein. (415 aa)
	PDE_09844	Uncharacterized protein. (223 aa)
	PDE_09073	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (303 aa)
	PDE_01636	Uncharacterized protein. (246 aa)
	PDE_02446	Uncharacterized protein. (187 aa)
	PDE_03684	Uncharacterized protein. (142 aa)
	PDE_03914	Ribosomal_L30 domain-containing protein. (94 aa)
	PDE_08220	L51_S25_CI-B8 domain-containing protein. (206 aa)
	PDE_06825	Uncharacterized protein. (94 aa)
	PDE_09522	Uncharacterized protein. (300 aa)
	PDE_09556	Uncharacterized protein. (272 aa)
	PDE_09511	Uncharacterized protein. (301 aa)
	PDE_04998	RF_PROK_I domain-containing protein. (224 aa)
	PDE_09351	Ribosomal_L5_C domain-containing protein. (355 aa)
	PDE_08734	Uncharacterized protein. (60 aa)
	PDE_04197	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (131 aa)
	PDE_07512	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (153 aa)
	PDE_01501	Uncharacterized protein. (203 aa)
	PDE_00359	RNase III domain-containing protein. (405 aa)
	PDE_02564	Uncharacterized protein. (359 aa)
	PDE_00757	Ribosomal_L18e/L15P domain-containing protein. (307 aa)
	PDE_02447	Uncharacterized protein. (523 aa)
	PDE_03221	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (233 aa)
	PDE_01977	Uncharacterized protein. (266 aa)
	PDE_04183	Uncharacterized protein. (148 aa)
	PDE_02860	Uncharacterized protein. (130 aa)
	PDE_04754	Uncharacterized protein. (191 aa)
	PDE_05477	Mitoc_mL59 domain-containing protein. (198 aa)
	PDE_03842	Uncharacterized protein. (165 aa)
	PDE_04761	Uncharacterized protein. (188 aa)
	PDE_06758	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (244 aa)
	PDE_05026	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (343 aa)
	PDE_06711	Uncharacterized protein. (227 aa)
	PDE_07395	Uncharacterized protein. (285 aa)
	PDE_07519	Uncharacterized protein. (200 aa)

Your Current Organism:

Penicillium oxalicum

NCBI taxonomy Id: 933388
Other names: P. oxalicum 114-2, Penicillium oxalicum 114-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PDE_00359	PDE_00757	S7Z9T0	S7ZAW4	RNase III domain-containing protein.	Ribosomal_L18e/L15P domain-containing protein.	0.974
PDE_00359	PDE_01501	S7Z9T0	S7Z8N1	RNase III domain-containing protein.	Uncharacterized protein.	0.922
PDE_00359	PDE_01636	S7Z9T0	S8ALG0	RNase III domain-containing protein.	Uncharacterized protein.	0.914
PDE_00359	PDE_01977	S7Z9T0	S7ZEB6	RNase III domain-containing protein.	Uncharacterized protein.	0.913
PDE_00359	PDE_02446	S7Z9T0	S8ANN3	RNase III domain-containing protein.	Uncharacterized protein.	0.883
PDE_00359	PDE_02447	S7Z9T0	S7ZB81	RNase III domain-containing protein.	Uncharacterized protein.	0.883
PDE_00359	PDE_02564	S7Z9T0	S7ZAI6	RNase III domain-containing protein.	Uncharacterized protein.	0.637
PDE_00359	PDE_02860	S7Z9T0	S7ZGZ3	RNase III domain-containing protein.	Uncharacterized protein.	0.973
PDE_00359	PDE_03221	S7Z9T0	S7ZCB9	RNase III domain-containing protein.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.935
PDE_00359	PDE_03684	S7Z9T0	S8ARU2	RNase III domain-containing protein.	Uncharacterized protein.	0.952
PDE_00359	PDE_03842	S7Z9T0	S7ZJQ7	RNase III domain-containing protein.	Uncharacterized protein.	0.985
PDE_00359	PDE_03914	S7Z9T0	S8ASD0	RNase III domain-containing protein.	Ribosomal_L30 domain-containing protein.	0.960
PDE_00359	PDE_04183	S7Z9T0	S7ZG43	RNase III domain-containing protein.	Uncharacterized protein.	0.863
PDE_00359	PDE_04197	S7Z9T0	S8AT20	RNase III domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.904
PDE_00359	PDE_04754	S7Z9T0	S7ZHR7	RNase III domain-containing protein.	Uncharacterized protein.	0.955
PDE_00359	PDE_04761	S7Z9T0	S7ZMB7	RNase III domain-containing protein.	Uncharacterized protein.	0.984
PDE_00359	PDE_04998	S7Z9T0	S8AV16	RNase III domain-containing protein.	RF_PROK_I domain-containing protein.	0.863
PDE_00359	PDE_05026	S7Z9T0	S7ZN07	RNase III domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.974
PDE_00359	PDE_05477	S7Z9T0	S7ZIR0	RNase III domain-containing protein.	Mitoc_mL59 domain-containing protein.	0.904
PDE_00359	PDE_06711	S7Z9T0	S7ZN40	RNase III domain-containing protein.	Uncharacterized protein.	0.919