STRINGSTRING
PDE_05880 PDE_05880 PDE_02461 PDE_02461 PDE_03334 PDE_03334 PDE_00370 PDE_00370 PDE_00371 PDE_00371 PDE_00369 PDE_00369
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDE_05880Rieske domain-containing protein. (550 aa)
PDE_02461Uncharacterized protein. (1056 aa)
PDE_03334GATA-type domain-containing protein. (896 aa)
PDE_00370Rieske domain-containing protein. (1089 aa)
PDE_00371Nitrate/nitrite transporter. (515 aa)
PDE_00369Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (870 aa)
Your Current Organism:
Penicillium oxalicum
NCBI taxonomy Id: 933388
Other names: P. oxalicum 114-2, Penicillium oxalicum 114-2
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