STRINGSTRING
PDE_05431 PDE_05431 PDE_00477 PDE_00477 PDE_09088 PDE_09088 PDE_07907 PDE_07907 PDE_08966 PDE_08966 PDE_08366 PDE_08366
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDE_05431Polyketide_cyc domain-containing protein. (229 aa)
PDE_00477Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. (170 aa)
PDE_09088Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (228 aa)
PDE_07907Uncharacterized protein. (259 aa)
PDE_08966Pyr_redox_2 domain-containing protein. (452 aa)
PDE_08366Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family. (473 aa)
Your Current Organism:
Penicillium oxalicum
NCBI taxonomy Id: 933388
Other names: P. oxalicum 114-2, Penicillium oxalicum 114-2
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