STRINGSTRING
PDE_09969 PDE_09969 PDE_08023 PDE_08023 PDE_07917 PDE_07917 PDE_07862 PDE_07862 PDE_09523 PDE_09523 PDE_09393 PDE_09393 PDE_09634 PDE_09634 PDE_09559 PDE_09559 PDE_09213 PDE_09213 PDE_09479 PDE_09479 PDE_08961 PDE_08961 PDE_08881 PDE_08881 PDE_07025 PDE_07025 PDE_08792 PDE_08792 PDE_08386 PDE_08386 PDE_08532 PDE_08532 PDE_08467 PDE_08467 PDE_08171 PDE_08171 PDE_08151 PDE_08151 PDE_06331 PDE_06331 PDE_06321 PDE_06321 PDE_08362 PDE_08362 PDE_06121 PDE_06121 PDE_06101 PDE_06101 PDE_05990 PDE_05990 PDE_07694 PDE_07694 PDE_07906 PDE_07906 PDE_07594 PDE_07594 PDE_07826 PDE_07826 PDE_07801 PDE_07801 PDE_07509 PDE_07509 PDE_07780 PDE_07780 PDE_07339 PDE_07339 PDE_07324 PDE_07324 PDE_07319 PDE_07319 PDE_07314 PDE_07314 PDE_05289 PDE_05289 PDE_07640 PDE_07640 PDE_07410 PDE_07410 PDE_06963 PDE_06963 PDE_05061 PDE_05061 PDE_07024 PDE_07024 PDE_06666 PDE_06666 PDE_06989 PDE_06989 PDE_06818 PDE_06818 PDE_06234 PDE_06234 PDE_04611 PDE_04611 PDE_06224 PDE_06224 PDE_06535 PDE_06535 PDE_06270 PDE_06270 PDE_03888 PDE_03888 PDE_08265 PDE_08265 PDE_08535 PDE_08535 PDE_04336 PDE_04336 PDE_08675 PDE_08675 PDE_04391 PDE_04391 PDE_08750 PDE_08750 PDE_04522 PDE_04522 PDE_04897 PDE_04897 PDE_09892 PDE_09892 PDE_09903 PDE_09903 PDE_05674 PDE_05674 PDE_09968 PDE_09968 PDE_09978 PDE_09978 PDE_05784 PDE_05784 PDE_05991 PDE_05991 PDE_06147 PDE_06147 PDE_07737 PDE_07737 PDE_07883 PDE_07883 PDE_07898 PDE_07898 PDE_08059 PDE_08059 PDE_08069 PDE_08069 PDE_08204 PDE_08204 PDE_08234 PDE_08234 PDE_08294 PDE_08294 PDE_09706 PDE_09706 PDE_09731 PDE_09731 PDE_08308 PDE_08308 PDE_08068 PDE_08068 PDE_06235 PDE_06235 PDE_04190 PDE_04190 PDE_04175 PDE_04175 PDE_05964 PDE_05964 PDE_03962 PDE_03962 PDE_05400 PDE_05400 PDE_03722 PDE_03722 PDE_03662 PDE_03662 PDE_03362 PDE_03362 PDE_04804 PDE_04804 PDE_03212 PDE_03212 PDE_03202 PDE_03202 PDE_05155 PDE_05155 PDE_02906 PDE_02906 PDE_04429 PDE_04429 PDE_04133 PDE_04133 PDE_02364 PDE_02364 PDE_02314 PDE_02314 PDE_02289 PDE_02289 PDE_02249 PDE_02249 PDE_02244 PDE_02244 PDE_03810 PDE_03810 PDE_02084 PDE_02084 PDE_01770 PDE_01770 PDE_03375 PDE_03375 PDE_03671 PDE_03671 PDE_01609 PDE_01609 PDE_03581 PDE_03581 PDE_01554 PDE_01554 PDE_01513 PDE_01513 PDE_02919 PDE_02919 PDE_02848 PDE_02848 PDE_03076 PDE_03076 PDE_02986 PDE_02986 PDE_02859 PDE_02859 PDE_02507 PDE_02507 PDE_00922 PDE_00922 PDE_02297 PDE_02297 PDE_05294 PDE_05294 PDE_00993 PDE_00993 URM1 URM1 PDE_05570 PDE_05570 PDE_01148 PDE_01148 PDE_01484 PDE_01484 PDE_01827 PDE_01827 PDE_01892 PDE_01892 PDE_06453 PDE_06453 PDE_06705 PDE_06705 PDE_02365 PDE_02365 PDE_02520 PDE_02520 PDE_02606 PDE_02606 PDE_02796 PDE_02796 PDE_07318 PDE_07318 NCS2 NCS2 PDE_07468 PDE_07468 PDE_07763 PDE_07763 PDE_07804 PDE_07804 PDE_03498 PDE_03498 PDE_03538 PDE_03538 PDE_03863 PDE_03863 PDE_00458 PDE_00458 PDE_04928 PDE_04928 PDE_00541 PDE_00541 PDE_00506 PDE_00506 PDE_00245 PDE_00245 uba4 uba4 PDE_04207 PDE_04207 PDE_04000 PDE_04000 PDE_03869 PDE_03869 PDE_03849 PDE_03849 PDE_03384 PDE_03384 PDE_02908 PDE_02908 NCS6 NCS6 PDE_01878 PDE_01878 PDE_01134 PDE_01134 PDE_00869 PDE_00869 PDE_09470 PDE_09470 PDE_09465 PDE_09465 PDE_09360 PDE_09360 PDE_09350 PDE_09350 PDE_00489 PDE_00489 PDE_00876 PDE_00876 PDE_00916 PDE_00916 PDE_00578 PDE_00578 PDE_00670 PDE_00670 PDE_00705 PDE_00705 PDE_00850 PDE_00850 PDE_01010 PDE_01010 PDE_01568 PDE_01568 PDE_01628 PDE_01628 PDE_01744 PDE_01744 PDE_01401 PDE_01401 PDE_01840 PDE_01840 PDE_01506 PDE_01506 PDE_01511 PDE_01511 PDE_00128 PDE_00128 PDE_02198 PDE_02198 PDE_02213 PDE_02213 PDE_00339 PDE_00339 PDE_02045 PDE_02045 PDE_00732 PDE_00732 PDE_00620 PDE_00620 PDE_02428 PDE_02428 PDE_09150 PDE_09150 PDE_09033 PDE_09033 PDE_09023 PDE_09023 PDE_08958 PDE_08958 PDE_08903 PDE_08903 PDE_08893 PDE_08893 PDE_08808 PDE_08808 PDE_08368 PDE_08368
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDE_09969Endo-beta-1,4-glucanase Cel5C. (655 aa)
PDE_08023RING-type domain-containing protein. (325 aa)
PDE_07917NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. (561 aa)
PDE_07862Uncharacterized protein. (304 aa)
PDE_09523Uncharacterized protein. (1543 aa)
PDE_09393UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (219 aa)
PDE_09634Uncharacterized protein. (817 aa)
PDE_09559UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)
PDE_09213Uncharacterized protein. (274 aa)
PDE_09479Uncharacterized protein. (161 aa)
PDE_08961Uncharacterized protein. (1095 aa)
PDE_08881SP-RING-type domain-containing protein. (507 aa)
PDE_07025RING-type domain-containing protein. (410 aa)
PDE_08792HECT domain-containing protein. (1811 aa)
PDE_08386SH3 domain-containing protein. (913 aa)
PDE_08532TPR_REGION domain-containing protein. (399 aa)
PDE_08467Uncharacterized protein. (875 aa)
PDE_08171Uncharacterized protein. (1029 aa)
PDE_08151UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (180 aa)
PDE_06331PCI domain-containing protein. (505 aa)
PDE_06321RING-type domain-containing protein. (795 aa)
PDE_08362Ubiquitin carboxyl-terminal hydrolase. (769 aa)
PDE_06121Uncharacterized protein. (908 aa)
PDE_06101Uncharacterized protein. (381 aa)
PDE_05990Uncharacterized protein. (346 aa)
PDE_07694UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family. (1033 aa)
PDE_07906Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. (634 aa)
PDE_07594OTU domain-containing protein. (508 aa)
PDE_07826Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (269 aa)
PDE_07801Uncharacterized protein. (409 aa)
PDE_07509WD_REPEATS_REGION domain-containing protein. (1026 aa)
PDE_07780UBIQUITIN_CONJUGAT_2 domain-containing protein. (343 aa)
PDE_07339Uncharacterized protein. (572 aa)
PDE_07324Uncharacterized protein. (474 aa)
PDE_07319Uncharacterized protein. (577 aa)
PDE_07314USP domain-containing protein; Belongs to the peptidase C19 family. (689 aa)
PDE_05289SP-RING-type domain-containing protein. (997 aa)
PDE_07640ULP_PROTEASE domain-containing protein. (463 aa)
PDE_07410CULLIN_2 domain-containing protein; Belongs to the cullin family. (874 aa)
PDE_06963CULLIN_2 domain-containing protein; Belongs to the cullin family. (950 aa)
PDE_05061UBIQUITIN_CONJUGAT_2 domain-containing protein. (154 aa)
PDE_07024E3 ubiquitin-protein ligase. (822 aa)
PDE_06666Uncharacterized protein; Belongs to the peptidase C19 family. (1535 aa)
PDE_06989CULLIN_2 domain-containing protein; Belongs to the cullin family. (836 aa)
PDE_06818Uncharacterized protein. (741 aa)
PDE_06234Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (606 aa)
PDE_04611UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
PDE_06224Uncharacterized protein. (642 aa)
PDE_06535Uncharacterized protein. (460 aa)
PDE_06270Uncharacterized protein. (955 aa)
PDE_03888Uncharacterized protein. (275 aa)
PDE_08265USP domain-containing protein; Belongs to the peptidase C19 family. (1255 aa)
PDE_08535UBIQUITIN_CONJUGAT_2 domain-containing protein. (139 aa)
PDE_04336Helicase ATP-binding domain-containing protein. (2235 aa)
PDE_08675RING-type domain-containing protein. (444 aa)
PDE_04391Uncharacterized protein. (667 aa)
PDE_08750UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (234 aa)
PDE_04522RING-type domain-containing protein. (775 aa)
PDE_04897Ubiquitin-like domain-containing protein. (154 aa)
PDE_09892TPR_REGION domain-containing protein. (772 aa)
PDE_09903TPR_REGION domain-containing protein. (704 aa)
PDE_05674Uncharacterized protein. (780 aa)
PDE_09968MINDY_DUB domain-containing protein. (807 aa)
PDE_09978Uncharacterized protein. (1190 aa)
PDE_05784UBIQUITIN_CONJUGAT_2 domain-containing protein. (276 aa)
PDE_05991RING-type domain-containing protein. (87 aa)
PDE_06147UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
PDE_07737WD_REPEATS_REGION domain-containing protein. (721 aa)
PDE_07883E3 ubiquitin-protein ligase PEP5. (953 aa)
PDE_07898TIP120 domain-containing protein. (1238 aa)
PDE_08059UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
PDE_08069Uncharacterized protein. (348 aa)
PDE_08204USP domain-containing protein. (488 aa)
PDE_08234RBR-type E3 ubiquitin transferase. (509 aa)
PDE_08294OTU domain-containing protein. (326 aa)
PDE_09706UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (234 aa)
PDE_09731MPN domain-containing protein. (398 aa)
PDE_08308Uncharacterized protein. (1444 aa)
PDE_08068UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)
PDE_06235Ubiquitin carboxyl-terminal hydrolase. (780 aa)
PDE_04190MYND-type domain-containing protein. (249 aa)
PDE_04175USP domain-containing protein; Belongs to the peptidase C19 family. (2536 aa)
PDE_05964Uncharacterized protein. (473 aa)
PDE_03962Uncharacterized protein. (770 aa)
PDE_05400RING-type domain-containing protein. (889 aa)
PDE_03722RING-type domain-containing protein. (532 aa)
PDE_03662U-box domain-containing protein. (1082 aa)
PDE_03362SAGA-associated factor 11; Functions as component of the transcription regulatory histone acetylation (HAT) complex SAGA. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA [...] (299 aa)
PDE_04804Ubiquitin carboxyl-terminal hydrolase. (629 aa)
PDE_03212Uncharacterized protein. (409 aa)
PDE_03202Uncharacterized protein. (668 aa)
PDE_05155Uncharacterized protein. (702 aa)
PDE_02906HECT domain-containing protein. (1202 aa)
PDE_04429RING-type domain-containing protein. (377 aa)
PDE_04133Ubiquitin-like domain-containing protein. (80 aa)
PDE_02364USP domain-containing protein; Belongs to the peptidase C19 family. (647 aa)
PDE_02314Uncharacterized protein. (485 aa)
PDE_02289RING-type domain-containing protein. (118 aa)
PDE_02249Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
PDE_02244ThiF domain-containing protein. (423 aa)
PDE_03810Uncharacterized protein. (637 aa)
PDE_02084UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
PDE_01770Uncharacterized protein. (523 aa)
PDE_03375Ubiquitin carboxyl-terminal hydrolase. (580 aa)
PDE_03671RING-type domain-containing protein. (529 aa)
PDE_01609ANAPC5 domain-containing protein. (768 aa)
PDE_03581E3 ubiquitin protein ligase. (705 aa)
PDE_01554Uncharacterized protein. (2100 aa)
PDE_01513Uncharacterized protein. (534 aa)
PDE_02919Uncharacterized protein. (414 aa)
PDE_02848Ubiquitin-like domain-containing protein. (667 aa)
PDE_03076Uncharacterized protein. (284 aa)
PDE_02986Uncharacterized protein. (1636 aa)
PDE_02859HECT domain-containing protein. (1240 aa)
PDE_02507Autophagy_act_C domain-containing protein. (235 aa)
PDE_00922Uncharacterized protein. (325 aa)
PDE_02297Uncharacterized protein. (405 aa)
PDE_05294MPN domain-containing protein. (335 aa)
PDE_00993RING-type domain-containing protein. (432 aa)
URM1Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (113 aa)
PDE_05570Uncharacterized protein. (328 aa)
PDE_01148Uncharacterized protein. (131 aa)
PDE_01484F-box domain-containing protein. (580 aa)
PDE_01827CIA30 domain-containing protein. (231 aa)
PDE_01892MPN domain-containing protein. (528 aa)
PDE_06453PCI domain-containing protein. (419 aa)
PDE_06705HECT domain-containing protein. (4032 aa)
PDE_02365Uncharacterized protein. (151 aa)
PDE_02520Uncharacterized protein. (1496 aa)
PDE_02606PHD-type domain-containing protein. (397 aa)
PDE_02796Pex2_Pex12 domain-containing protein. (484 aa)
PDE_07318Uncharacterized protein. (415 aa)
NCS2Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. (367 aa)
PDE_07468Uncharacterized protein. (585 aa)
PDE_07763MPN domain-containing protein. (333 aa)
PDE_07804RING-type domain-containing protein. (494 aa)
PDE_03498RING-type domain-containing protein. (301 aa)
PDE_03538RBR-type E3 ubiquitin transferase. (644 aa)
PDE_03863RING-type domain-containing protein. (844 aa)
PDE_00458Uncharacterized protein. (534 aa)
PDE_04928RING-type domain-containing protein. (150 aa)
PDE_00541DOC domain-containing protein. (464 aa)
PDE_00506Ubiquitin carboxyl-terminal hydrolase. (318 aa)
PDE_00245RING-type domain-containing protein. (1624 aa)
uba4Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] (491 aa)
PDE_04207Uncharacterized protein. (807 aa)
PDE_04000Uncharacterized protein. (921 aa)
PDE_03869E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2151 aa)
PDE_03849Putative carbohydrate acetylesterase. (346 aa)
PDE_03384UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)
PDE_02908RING-type domain-containing protein. (429 aa)
NCS6Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. (417 aa)
PDE_01878RING-type domain-containing protein. (1044 aa)
PDE_01134BTB domain-containing protein. (217 aa)
PDE_00869RING-type domain-containing protein. (130 aa)
PDE_09470Uncharacterized protein; Belongs to the peptidase C19 family. (1117 aa)
PDE_09465ULP_PROTEASE domain-containing protein. (1171 aa)
PDE_09360WHIM1 domain-containing protein. (575 aa)
PDE_09350USP domain-containing protein. (770 aa)
PDE_00489Uncharacterized protein. (839 aa)
PDE_00876NLPC_P60 domain-containing protein. (242 aa)
PDE_00916CSN8_PSD8_EIF3K domain-containing protein. (220 aa)
PDE_00578BTB domain-containing protein. (689 aa)
PDE_00670Ubiquitin-like domain-containing protein. (94 aa)
PDE_00705WLM domain-containing protein. (345 aa)
PDE_00850RING-type domain-containing protein. (383 aa)
PDE_01010Uncharacterized protein. (519 aa)
PDE_01568UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
PDE_01628Uncharacterized protein. (462 aa)
PDE_01744RING-type domain-containing protein. (371 aa)
PDE_01401zf-RING-like domain-containing protein. (321 aa)
PDE_01840PCI domain-containing protein. (494 aa)
PDE_01506Ubiquitin carboxyl-terminal hydrolase. (403 aa)
PDE_01511OTU domain-containing protein. (339 aa)
PDE_00128CULLIN_2 domain-containing protein; Belongs to the cullin family. (764 aa)
PDE_02198RING-type domain-containing protein. (185 aa)
PDE_02213RING-CH-type domain-containing protein. (279 aa)
PDE_00339ULP_PROTEASE domain-containing protein. (259 aa)
PDE_02045UBR-type domain-containing protein. (548 aa)
PDE_00732RING-type domain-containing protein. (804 aa)
PDE_00620UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (463 aa)
PDE_02428Ubiquitin carboxyl-terminal hydrolase. (846 aa)
PDE_09150Uncharacterized protein. (559 aa)
PDE_09033HECT domain-containing protein. (1338 aa)
PDE_09023BZIP domain-containing protein. (304 aa)
PDE_08958BTB domain-containing protein. (1666 aa)
PDE_08903CHY-type domain-containing protein. (707 aa)
PDE_08893RING-type domain-containing protein. (217 aa)
PDE_08808RING-type domain-containing protein. (1531 aa)
PDE_08368E2_bind domain-containing protein. (423 aa)
Your Current Organism:
Penicillium oxalicum
NCBI taxonomy Id: 933388
Other names: P. oxalicum 114-2, Penicillium oxalicum 114-2
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