4 items (Penicillium oxalicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDE_05415	Uncharacterized protein. (310 aa)
	PDE_02249	Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
	PDE_00922	Uncharacterized protein. (325 aa)
	PDE_00217	Rav1p_C domain-containing protein. (1335 aa)

Your Current Organism:

Penicillium oxalicum

NCBI taxonomy Id: 933388
Other names: P. oxalicum 114-2, Penicillium oxalicum 114-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PDE_00217	PDE_00922	S7Z5A1	S7ZBC5	Rav1p_C domain-containing protein.	Uncharacterized protein.	0.798
PDE_00217	PDE_02249	S7Z5A1	S7ZF79	Rav1p_C domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.924
PDE_00217	PDE_05415	S7Z5A1	S7ZJI9	Rav1p_C domain-containing protein.	Uncharacterized protein.	0.890
PDE_00922	PDE_00217	S7ZBC5	S7Z5A1	Uncharacterized protein.	Rav1p_C domain-containing protein.	0.798
PDE_00922	PDE_05415	S7ZBC5	S7ZJI9	Uncharacterized protein.	Uncharacterized protein.	0.575
PDE_02249	PDE_00217	S7ZF79	S7Z5A1	Uncharacterized protein; Belongs to the SKP1 family.	Rav1p_C domain-containing protein.	0.924
PDE_02249	PDE_05415	S7ZF79	S7ZJI9	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.575
PDE_05415	PDE_00217	S7ZJI9	S7Z5A1	Uncharacterized protein.	Rav1p_C domain-containing protein.	0.890
PDE_05415	PDE_00922	S7ZJI9	S7ZBC5	Uncharacterized protein.	Uncharacterized protein.	0.575
PDE_05415	PDE_02249	S7ZJI9	S7ZF79	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.575