STRINGSTRING
PDE_09417 PDE_09417 PDE_01354 PDE_01354 PDE_05527 PDE_05527 PDE_01201 PDE_01201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDE_09417Glucoamylase. (635 aa)
PDE_01354Starch binding domain-and chitin binding domain-containing protein. (403 aa)
PDE_05527Glucoamylase. (616 aa)
PDE_01201Alpha-amylase Amy13A. (626 aa)
Your Current Organism:
Penicillium oxalicum
NCBI taxonomy Id: 933388
Other names: P. oxalicum 114-2, Penicillium oxalicum 114-2
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