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| | KIT18171.1 | Transposase. (88 aa) |
| | dusC | tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (325 aa) |
| | hda | DnaA regulatory inactivator Hda. (216 aa) |
| | proS | Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. (445 aa) |
| | KIT18168.1 | Transposase. (140 aa) |
| | KIT18170.1 | Transposase. (88 aa) |
| | KIT18098.1 | Transposase. (110 aa) |
| | KIT18099.1 | Integrase core domain protein. (179 aa) |
| | KIT18100.1 | Hypothetical protein. (77 aa) |
| | bin3 | Putative transposon Tn552 DNA-invertase. (200 aa) |
| | cas2 | CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (95 aa) |
| | cas4-cas1 | CRISPR-associated protein Cas4/endonuclease Cas1 fusion; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (342 aa) |
| | KIT18125.1 | PD-(D/E)XK nuclease superfamily protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. (203 aa) |
| | KIT18126.1 | Hypothetical protein. (315 aa) |
| | cas5 | CRISPR-associated protein Cas5. (219 aa) |
| | KIT18025.1 | Putative rhodanese-related sulfurtransferase; Belongs to the UPF0176 family. (298 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa) |
| | KIT17983.1 | Hypothetical protein. (178 aa) |
| | parC | DNA topoisomerase 4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (772 aa) |
| | KIT17982.1 | Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (146 aa) |
| | rnjA | Ribonuclease J 1. (556 aa) |
| | rhlE_1 | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. (485 aa) |
| | nth_1 | Endonuclease III. (218 aa) |
| | KIT17900.1 | Hypothetical protein. (165 aa) |
| | ybaK | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK. (155 aa) |
| | dnaE1 | DNA polymerase III subunit alpha. (1190 aa) |
| | mutS | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (875 aa) |
| | rsmA | Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (277 aa) |
| | KIT17844.1 | DNA polymerase III subunit chi. (153 aa) |
| | KIT17783.1 | Endonuclease/Exonuclease/phosphatase family protein. (285 aa) |
| | KIT17792.1 | Hypothetical protein. (288 aa) |
| | dnaX | DNA polymerase III subunit tau. (355 aa) |
| | ycfH | Putative deoxyribonuclease YcfH. (264 aa) |
| | KIT17745.1 | Transcriptional regulator BolA; Belongs to the BolA/IbaG family. (84 aa) |
| | dnaJ_1 | Chaperone protein DnaJ. (204 aa) |
| | mnmC_1 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC. (216 aa) |
| | ihfA | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (100 aa) |
| | rlmE | Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (285 aa) |
| | KIT17640.1 | Hypothetical protein. (294 aa) |
| | recD2 | ATP-dependent RecD-like DNA helicase. (507 aa) |
| | tsaB | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. (207 aa) |
| | KIT17672.1 | Hypothetical protein. (131 aa) |
| | lysS | Lysine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (524 aa) |
| | recQ_1 | ATP-dependent DNA helicase RecQ. (681 aa) |
| | rsmD | Ribosomal RNA small subunit methyltransferase D. (189 aa) |
| | xseA | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (540 aa) |
| | rluB | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. (433 aa) |
| | tadA | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (147 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (255 aa) |
| | psuG | Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. (303 aa) |
| | aspS | Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (644 aa) |
| | tdk | Thymidine kinase. (200 aa) |
| | KIT17523.1 | Uracil DNA glycosylase superfamily protein. (475 aa) |
| | KIT17524.1 | Hypothetical protein. (409 aa) |
| | topA | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (900 aa) |
| | rnpA | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (97 aa) |
| | KIT17390.1 | Hypothetical protein. (78 aa) |
| | uvrC | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (625 aa) |
| | KIT17362.1 | Transposase DDE domain protein. (243 aa) |
| | rnd_1 | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. (377 aa) |
| | recA | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (356 aa) |
| | alaS_1 | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (882 aa) |
| | glyQ | Glycine--tRNA ligase alpha subunit. (306 aa) |
| | KIT17197.1 | Hypothetical protein. (179 aa) |
| | glyS | Glycine--tRNA ligase beta subunit. (748 aa) |
| | KIT17215.1 | Hypothetical protein. (222 aa) |
| | parE | DNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (650 aa) |
| | uvrA | UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (952 aa) |
| | KIT17243.1 | Hypothetical protein. (241 aa) |
| | KIT17244.1 | Hypothetical protein. (497 aa) |
| | dnaE2 | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1211 aa) |
| | ssb | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. (159 aa) |
| | tusA | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. (71 aa) |
| | argS | Arginine--tRNA ligase. (581 aa) |
| | KIT17073.1 | DNA polymerase III subunits gamma and tau. (166 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (198 aa) |
| | KIT17078.1 | Ribonuclease I; Belongs to the RNase T2 family. (209 aa) |
| | ywlC | Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. (317 aa) |
| | rsmE | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (243 aa) |
| | xseB | Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (78 aa) |
| | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (401 aa) |
| | cca | CCA-adding enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (377 aa) |
| | rluE | Ribosomal large subunit pseudouridine synthase E; Belongs to the pseudouridine synthase RsuA family. (175 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (934 aa) |
| | gltX_1 | Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (463 aa) |
| | lexA_1 | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (231 aa) |
| | mnmA | tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (378 aa) |
| | ligA | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. (748 aa) |
| | rsmH | Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (323 aa) |
| | rlmB | 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (259 aa) |
| | sigW | ECF RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa) |
| | mutM_1 | Formamidopyrimidine-DNA glycosylase. (263 aa) |
| | KIT16669.1 | Eukaryotic DNA topoisomerase I, catalytic core. (319 aa) |
| | yfhQ | Putative A/G-specific adenine glycosylase YfhQ; Adenine glycosylase active on G-A mispairs. (338 aa) |
| | xthA_1 | Exodeoxyribonuclease III. (262 aa) |
| | leuS | Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (865 aa) |
| | KIT16722.1 | DNA polymerase III subunit delta. (327 aa) |
| | hyi | Hydroxypyruvate isomerase. (246 aa) |
| | KIT16728.1 | Hypothetical protein. (60 aa) |
| | KIT16731.1 | ISXO2-like transposase domain protein. (320 aa) |
| | paaX | Transcriptional repressor PaaX. (259 aa) |
| | KIT16644.1 | Hypothetical protein. (70 aa) |
| | tag | DNA-3-methyladenine glycosylase 1. (191 aa) |
| | ruvB | Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (339 aa) |
| | KIT16610.1 | Hypothetical protein. (317 aa) |
| | KIT16611.1 | Hypothetical protein. (150 aa) |
| | hin_1 | DNA-invertase hin. (359 aa) |
| | KIT16613.1 | Hypothetical protein. (82 aa) |
| | KIT16614.1 | Hypothetical protein. (121 aa) |
| | hin_2 | DNA-invertase hin. (203 aa) |
| | KIT16589.1 | Hypothetical protein. (152 aa) |
| | dinB_1 | DNA polymerase IV. (423 aa) |
| | lexA_2 | LexA repressor; Belongs to the peptidase S24 family. (144 aa) |
| | KIT16597.1 | Hypothetical protein. (163 aa) |
| | miaB | (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (440 aa) |
| | ybeY | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (164 aa) |
| | rnc | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (226 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (239 aa) |
| | KIT16523.1 | Hypothetical protein. (221 aa) |
| | rpoD | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (659 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (639 aa) |
| | rimO | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (454 aa) |
| | smc_1 | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1150 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (167 aa) |
| | KIT16366.1 | Relaxase/mobilization nuclease domain protein. (438 aa) |
| | ttcA | tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. (282 aa) |
| | KIT16323.1 | GIY-YIG nuclease superfamily protein. (96 aa) |
| | rlmH | Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (150 aa) |
| | KIT16351.1 | AFG1-like ATPase. (358 aa) |
| | rng | Ribonuclease G. (337 aa) |
| | tgt | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] (375 aa) |
| | thrS | Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). (648 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (492 aa) |
| | radA | Hypothetical protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (462 aa) |
| | gltX_2 | Glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (255 aa) |
| | trmFO | Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (452 aa) |
| | gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (912 aa) |
| | mfd | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1162 aa) |
| | xerD | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (300 aa) |
| | yrrK | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (157 aa) |
| | rlmL | Ribosomal RNA large subunit methyltransferase L. (381 aa) |
| | miaA | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (289 aa) |
| | ykoU | Putative ATP-dependent DNA ligase YkoU. (540 aa) |
| | KIT16018.1 | Hypothetical protein. (338 aa) |
| | KIT16021.1 | Putative tRNA/rRNA methyltransferase. (243 aa) |
| | alkA | DNA-3-methyladenine glycosylase 2. (207 aa) |
| | KIT16043.1 | HNH endonuclease. (205 aa) |
| | xthA_2 | Exodeoxyribonuclease III. (261 aa) |
| | recJ | Single-stranded-DNA-specific exonuclease RecJ. (575 aa) |
| | metG_1 | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (569 aa) |
| | nucH | Thermonuclease precursor. (215 aa) |
| | gltX1 | Glutamate--tRNA ligase 1; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (440 aa) |
| | recN | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (553 aa) |
| | yafP | Putative N-acetyltransferase YafP. (162 aa) |
| | nrdJ | Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (1217 aa) |
| | KIT15789.1 | Transposase. (180 aa) |
| | KIT15806.1 | Hypothetical protein. (129 aa) |
| | KIT15807.1 | Transposase IS116/IS110/IS902 family protein. (262 aa) |
| | KIT15746.1 | Uracil DNA glycosylase superfamily protein. (146 aa) |
| | alaS_2 | Alanine--tRNA ligase. (238 aa) |
| | KIT15778.1 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. (412 aa) |
| | rnr | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. (757 aa) |
| | gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (803 aa) |
| | recF_2 | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (356 aa) |
| | dnaN | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (372 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (440 aa) |
| | mutM_2 | Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (282 aa) |
| | rlmN | Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (391 aa) |
| | valS | Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (1076 aa) |
| | rhlE_2 | ATP-dependent RNA helicase RhlE. (402 aa) |
| | dus | Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (332 aa) |
| | rsmB | Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (383 aa) |
| | KIT15662.1 | Integrase core domain protein. (85 aa) |
| | KIT15557.1 | IS2 transposase TnpB. (255 aa) |
| | KIT15558.1 | Transposase. (92 aa) |
| | KIT15567.1 | Hypothetical protein. (619 aa) |
| | KIT15587.1 | IS2 transposase TnpB. (277 aa) |
| | KIT15588.1 | Transposase. (152 aa) |
| | KIT15592.1 | Integrase core domain protein. (748 aa) |
| | hrpB | ATP-dependent RNA helicase HrpB. (776 aa) |
| | KIT15612.1 | Hypothetical protein. (45 aa) |
| | KIT15622.1 | Transposase. (88 aa) |
| | KIT15473.1 | DNA recombination protein RmuC. (302 aa) |
| | mutL | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (593 aa) |
| | rbfA | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (139 aa) |
| | truB | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (299 aa) |
| | pnp | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (710 aa) |
| | xerC_1 | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (307 aa) |
| | KIT15533.1 | Hypothetical protein. (120 aa) |
| | KIT15534.1 | Endonuclease/Exonuclease/phosphatase family protein. (332 aa) |
| | tilS | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. (365 aa) |
| | rluA | Ribosomal large subunit pseudouridine synthase A; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (218 aa) |
| | dinB_2 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (417 aa) |
| | tsaD | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (355 aa) |
| | KIT15397.1 | Mitochondrial inner membrane protein. (469 aa) |
| | sigR | ECF RNA polymerase sigma factor SigR; Belongs to the sigma-70 factor family. ECF subfamily. (190 aa) |
| | KIT15442.1 | PD-(D/E)XK nuclease superfamily protein. (975 aa) |
| | tsaE | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. (183 aa) |
| | KIT15468.1 | 5-methylcytosine-specific restriction enzyme subunit McrC. (430 aa) |
| | mcrB | 5-methylcytosine-specific restriction enzyme B. (751 aa) |
| | recQ_3 | ATP-dependent DNA helicase RecQ. (699 aa) |
| | flbT | Flagellum biosynthesis repressor protein FlbT. (135 aa) |
| | rpoE_1 | ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (227 aa) |
| | pheT | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (800 aa) |
| | pheS | Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (354 aa) |
| | rpoC | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1412 aa) |
| | rpoB | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1380 aa) |
| | nusG | Hypothetical protein; Participates in transcription elongation, termination and antitermination. (177 aa) |
| | cysS | Cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (456 aa) |
| | selU | tRNA 2-selenouridine synthase; Belongs to the SelU family. (349 aa) |
| | nudG | CTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family. (136 aa) |
| | KIT14832.1 | NYN domain protein. (231 aa) |
| | nusA | Hypothetical protein; Participates in both transcription termination and antitermination. (545 aa) |
| | bchM | Magnesium-protoporphyrin O-methyltransferase. (218 aa) |
| | yhaO | Putative metallophosphoesterase YhaO. (377 aa) |
| | mutS2 | Endonuclease MutS2. (194 aa) |
| | dnaQ | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (227 aa) |
| | rho | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (428 aa) |
| | mnmE | tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (428 aa) |
| | mnmG | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. Belongs to the MnmG family. (575 aa) |
| | rsmG | Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (200 aa) |
| | rph | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (237 aa) |
| | mtaB | Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB. (421 aa) |
| | rpoE_2 | ECF RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (191 aa) |
| | KIT15071.1 | Hypothetical protein. (118 aa) |
| | ada | Bifunctional transcriptional activator/DNA repair enzyme Ada. (289 aa) |
| | nth_2 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (217 aa) |
| | hisS | Histidine--tRNA ligase. (518 aa) |
| | dnaJ_2 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (384 aa) |
| | alkB | Alpha-ketoglutarate-dependent dioxygenase AlkB. (203 aa) |
| | rnd_2 | Ribonuclease D. (208 aa) |
| | KIT15115.1 | Endonuclease/Exonuclease/phosphatase family protein. (217 aa) |
| | queG | Epoxyqueuosine reductase. (328 aa) |
| | dpnA | Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family. (367 aa) |
| | rnhB | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (210 aa) |
| | rhlE_3 | ATP-dependent RNA helicase RhlE. (430 aa) |
| | tyrS | Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. (396 aa) |
| | KIT14799.1 | Hypothetical protein. (126 aa) |
| | hin_3 | DNA-invertase hin. (386 aa) |
| | KIT14802.1 | Hypothetical protein. (166 aa) |
| | KIT14779.1 | Hypothetical protein. (248 aa) |
| | KIT14789.1 | Hypothetical protein. (71 aa) |
| | hin_4 | DNA-invertase hin. (193 aa) |
| | KIT14776.1 | Hypothetical protein; Mu transposase, C-terminal. (500 aa) |
| | KIT14777.1 | Hypothetical protein. (198 aa) |
| | fitB_1 | Toxin FitB. (142 aa) |
| | KIT14761.1 | Hypothetical protein. (45 aa) |
| | KIT14762.1 | Transposase DDE domain protein. (134 aa) |
| | KIT14763.1 | Hypothetical protein. (111 aa) |
| | KIT14765.1 | Hypothetical protein. (96 aa) |
| | KIT14766.1 | Integrase core domain protein. (240 aa) |
| | polC | DNA polymerase III PolC-type. (463 aa) |
| | KIT14752.1 | Endonuclease/Exonuclease/phosphatase family protein. (1395 aa) |
| | KIT14717.1 | Relaxase/mobilization nuclease domain protein. (423 aa) |
| | KIT14719.1 | MarR family protein. (137 aa) |
| | KIT14720.1 | Initiator Replication protein. (353 aa) |
| | xerC_2 | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. (535 aa) |
| | intA | Prophage CP4-57 integrase; Belongs to the 'phage' integrase family. (241 aa) |
| | moaA_1 | Cyclic pyranopterin monophosphate synthase. (353 aa) |
| | KIT14672.1 | Hypothetical protein. (280 aa) |
| | rne | Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (978 aa) |
| | KIT14701.1 | BolA-like protein; Belongs to the BolA/IbaG family. (80 aa) |
| | fitB_2 | Toxin FitB; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (140 aa) |
| | serS | Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (431 aa) |
| | rimM | Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (180 aa) |
| | trmD | tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (263 aa) |
| | rpoH_1 | RNA polymerase sigma factor RpoH; Belongs to the sigma-70 factor family. (292 aa) |
| | KIT14616.1 | Hypothetical protein; Belongs to the UPF0102 family. (116 aa) |
| | rsmI | Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (286 aa) |
| | KIT14424.1 | Hypothetical protein. (182 aa) |
| | rlmI | Ribosomal RNA large subunit methyltransferase I; Belongs to the methyltransferase superfamily. (392 aa) |
| | ihfB | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (94 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (733 aa) |
| | KIT14505.1 | Deoxyribodipyrimidine photo-lyase-related protein. (509 aa) |
| | rpoZ | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (117 aa) |
| | KIT14517.1 | NYN domain protein. (211 aa) |
| | rnhA | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (154 aa) |
| | KIT14524.1 | Hypothetical protein. (358 aa) |
| | ileS | Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. (983 aa) |
| | rbn_2 | Ribonuclease BN. (288 aa) |
| | metG_2 | Methionine--tRNA ligase. (110 aa) |
| | ogt | Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (161 aa) |
| | rpoH_2 | RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (298 aa) |
| | rluD | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (285 aa) |
| | KIT14410.1 | Hypothetical protein. (89 aa) |
| | KIT14411.1 | Transposase. (88 aa) |
| | KIT14326.1 | FtsX-like permease family protein. (789 aa) |
| | rluC | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (342 aa) |
| | rarA | Replication-associated recombination protein A. (443 aa) |
| | rpoA | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (338 aa) |
| | KIT14372.1 | Hypothetical protein. (401 aa) |
| | trpS | Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (337 aa) |
| | rtcB | RNA-splicing ligase RtcB. (483 aa) |
| | nrdZ | Ribonucleoside-diphosphate reductase NrdZ; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (751 aa) |
| | trmL | tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. (150 aa) |
| | uvrB | UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (730 aa) |
| | fmt | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (314 aa) |
| | KIT14310.1 | PAAR motif protein. (85 aa) |
