(11 nodes) Zinc-binding ribosomal protein, and Formation of a pool of free 40S subunits network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_02556	Uncharacterized protein. (156 aa)
	NEQG_02139	Ribosomal protein L37; Binds to the 23S rRNA. (83 aa)
	NEQG_02181	Uncharacterized protein. (53 aa)
	NEQG_01887	50S ribosomal protein L31e. (115 aa)
	NEQG_01567	Ribosomal protein L23P. (121 aa)
	NEQG_01295	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (95 aa)
	NEQG_01426	Uncharacterized protein. (150 aa)
	NEQG_00630	Ribosomal protein L37a-2. (92 aa)
	NEQG_00346	50S ribosomal protein L34e. (107 aa)
	NEQG_00350	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family. (104 aa)
	NEQG_00508	60s ribosomal protein l35a. (130 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00346	NEQG_00350	I3EK29	I3EK33	50S ribosomal protein L34e.	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	0.997
NEQG_00346	NEQG_00508	I3EK29	I3EKJ1	50S ribosomal protein L34e.	60s ribosomal protein l35a.	0.999
NEQG_00346	NEQG_00630	I3EK29	I3EHW4	50S ribosomal protein L34e.	Ribosomal protein L37a-2.	0.998
NEQG_00346	NEQG_01295	I3EK29	I3EHA8	50S ribosomal protein L34e.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
NEQG_00346	NEQG_01426	I3EK29	I3EHN9	50S ribosomal protein L34e.	Uncharacterized protein.	0.999
NEQG_00346	NEQG_01567	I3EK29	I3EFX6	50S ribosomal protein L34e.	Ribosomal protein L23P.	0.999
NEQG_00346	NEQG_01887	I3EK29	I3EF18	50S ribosomal protein L34e.	50S ribosomal protein L31e.	0.999
NEQG_00346	NEQG_02139	I3EK29	I3EEE5	50S ribosomal protein L34e.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
NEQG_00346	NEQG_02181	I3EK29	I3EEI7	50S ribosomal protein L34e.	Uncharacterized protein.	0.997
NEQG_00346	NEQG_02556	I3EK29	I3EDC4	50S ribosomal protein L34e.	Uncharacterized protein.	0.999
NEQG_00350	NEQG_00346	I3EK33	I3EK29	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	50S ribosomal protein L34e.	0.997
NEQG_00350	NEQG_00508	I3EK33	I3EKJ1	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	60s ribosomal protein l35a.	0.999
NEQG_00350	NEQG_00630	I3EK33	I3EHW4	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L37a-2.	0.999
NEQG_00350	NEQG_01295	I3EK33	I3EHA8	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.997
NEQG_00350	NEQG_01426	I3EK33	I3EHN9	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein.	0.999
NEQG_00350	NEQG_01567	I3EK33	I3EFX6	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L23P.	0.999
NEQG_00350	NEQG_01887	I3EK33	I3EF18	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	50S ribosomal protein L31e.	0.999
NEQG_00350	NEQG_02139	I3EK33	I3EEE5	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
NEQG_00350	NEQG_02181	I3EK33	I3EEI7	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein.	0.999
NEQG_00350	NEQG_02556	I3EK33	I3EDC4	60s ribosomal protein l44; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein.	0.999