(22 nodes) Formation of the ternary complex, and subsequently, the 43S complex network (Nematocida parisii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	NEQG_02506	40S ribosomal protein S27. (82 aa)
	NEQG_02372	Uncharacterized protein. (245 aa)
	NEQG_01832	30S ribosomal protein S7. (196 aa)
	NEQG_01834	30S ribosomal protein S14p/S29e. (64 aa)
	NEQG_02031	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (111 aa)
	NEQG_02069	40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family. (140 aa)
	NEQG_01543	Eukaryotic translation initiation factor 5B. (694 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	NEQG_01281	30S ribosomal protein S10p/S20e. (120 aa)
	NEQG_01351	Ribosomal protein S17. (122 aa)
	NEQG_00594	30S ribosomal protein S8. (126 aa)
	NEQG_00639	Uncharacterized protein. (137 aa)
	NEQG_00685	30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (146 aa)
	NEQG_00894	30S ribosomal protein S21e. (70 aa)
	NEQG_00919	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (277 aa)
	NEQG_00986	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (118 aa)
	NEQG_00270	Ribosomal_S3_C domain-containing protein. (244 aa)
	NEQG_00276	30S ribosomal protein S28e. (67 aa)
	NEQG_00361	Ribosomal_L7Ae domain-containing protein. (132 aa)
	NEQG_00371	S1-like domain-containing protein. (123 aa)
	NEQG_00490	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (177 aa)
	NEQG_00562	30S ribosomal protein S19e. (147 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00270	NEQG_00276	I3EJV3	I3EJV9	Ribosomal_S3_C domain-containing protein.	30S ribosomal protein S28e.	0.999
NEQG_00270	NEQG_00361	I3EJV3	I3EK44	Ribosomal_S3_C domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.999
NEQG_00270	NEQG_00371	I3EJV3	I3EK54	Ribosomal_S3_C domain-containing protein.	S1-like domain-containing protein.	0.999
NEQG_00270	NEQG_00490	I3EJV3	I3EKH3	Ribosomal_S3_C domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
NEQG_00270	NEQG_00562	I3EJV3	I3EKP5	Ribosomal_S3_C domain-containing protein.	30S ribosomal protein S19e.	0.999
NEQG_00270	NEQG_00594	I3EJV3	I3EHS8	Ribosomal_S3_C domain-containing protein.	30S ribosomal protein S8.	0.999
NEQG_00270	NEQG_00639	I3EJV3	I3EHX3	Ribosomal_S3_C domain-containing protein.	Uncharacterized protein.	0.999
NEQG_00270	NEQG_00685	I3EJV3	I3EI19	Ribosomal_S3_C domain-containing protein.	30S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.999
NEQG_00270	NEQG_00894	I3EJV3	I3EIM8	Ribosomal_S3_C domain-containing protein.	30S ribosomal protein S21e.	0.999
NEQG_00270	NEQG_00919	I3EJV3	I3EIQ3	Ribosomal_S3_C domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
NEQG_00270	NEQG_00986	I3EJV3	I3EIX0	Ribosomal_S3_C domain-containing protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
NEQG_00270	NEQG_01281	I3EJV3	I3EH94	Ribosomal_S3_C domain-containing protein.	30S ribosomal protein S10p/S20e.	0.999
NEQG_00270	NEQG_01351	I3EJV3	I3EHG4	Ribosomal_S3_C domain-containing protein.	Ribosomal protein S17.	0.999
NEQG_00270	NEQG_01543	I3EJV3	I3EFV2	Ribosomal_S3_C domain-containing protein.	Eukaryotic translation initiation factor 5B.	0.996
NEQG_00270	NEQG_01832	I3EJV3	I3EEW3	Ribosomal_S3_C domain-containing protein.	30S ribosomal protein S7.	0.999
NEQG_00270	NEQG_01834	I3EJV3	I3EEW5	Ribosomal_S3_C domain-containing protein.	30S ribosomal protein S14p/S29e.	0.999
NEQG_00270	NEQG_02031	I3EJV3	I3EFG2	Ribosomal_S3_C domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
NEQG_00270	NEQG_02069	I3EJV3	I3EFK0	Ribosomal_S3_C domain-containing protein.	40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family.	0.999
NEQG_00270	NEQG_02372	I3EJV3	I3EE44	Ribosomal_S3_C domain-containing protein.	Uncharacterized protein.	0.999
NEQG_00270	NEQG_02506	I3EJV3	I3EDT6	Ribosomal_S3_C domain-containing protein.	40S ribosomal protein S27.	0.999