(18 nodes) Carbon metabolism network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_02598	Glyceraldehyde-3-phosphate dehydrogenase. (337 aa)
	NEQG_02449	Fructose-bisphosphate aldolase class-I. (341 aa)
	NEQG_02152	Transketolase. (729 aa)
	NEQG_01950	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (335 aa)
	NEQG_01958	Uncharacterized protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (463 aa)
	NEQG_01454	Uncharacterized protein. (781 aa)
	NEQG_01316	Pyruvate dehydrogenase type II alpha subunit. (354 aa)
	NEQG_01355	Glucose-6-phosphate isomerase; Belongs to the GPI family. (540 aa)
	NEQG_01405	Uncharacterized protein. (216 aa)
	NEQG_00819	Glucosamine_iso domain-containing protein. (204 aa)
	NEQG_00880	Pyruvate kinase; Belongs to the pyruvate kinase family. (409 aa)
	NEQG_00893	Triosephosphate isomerase. (249 aa)
	NEQG_00197	PfkB domain-containing protein. (341 aa)
	NEQG_00245	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family. (454 aa)
	NEQG_00301	Uncharacterized protein. (586 aa)
	NEQG_00421	Uncharacterized protein. (213 aa)
	NEQG_00552	Enolase_N domain-containing protein. (318 aa)
	NEQG_00560	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (433 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00197	NEQG_00245	I3EJN0	I3EJS8	PfkB domain-containing protein.	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	0.448
NEQG_00197	NEQG_00421	I3EJN0	I3EKA4	PfkB domain-containing protein.	Uncharacterized protein.	0.885
NEQG_00197	NEQG_00552	I3EJN0	I3EKN5	PfkB domain-containing protein.	Enolase_N domain-containing protein.	0.435
NEQG_00197	NEQG_00819	I3EJN0	I3EIF3	PfkB domain-containing protein.	Glucosamine_iso domain-containing protein.	0.854
NEQG_00197	NEQG_00880	I3EJN0	I3EIL4	PfkB domain-containing protein.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.411
NEQG_00197	NEQG_00893	I3EJN0	I3EIM7	PfkB domain-containing protein.	Triosephosphate isomerase.	0.456
NEQG_00197	NEQG_01316	I3EJN0	I3EHC9	PfkB domain-containing protein.	Pyruvate dehydrogenase type II alpha subunit.	0.877
NEQG_00197	NEQG_01355	I3EJN0	I3EHG8	PfkB domain-containing protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.856
NEQG_00197	NEQG_01405	I3EJN0	I3EHL8	PfkB domain-containing protein.	Uncharacterized protein.	0.849
NEQG_00197	NEQG_01454	I3EJN0	I3EFL3	PfkB domain-containing protein.	Uncharacterized protein.	0.849
NEQG_00197	NEQG_01950	I3EJN0	I3EF81	PfkB domain-containing protein.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.478
NEQG_00197	NEQG_02152	I3EJN0	I3EEF8	PfkB domain-containing protein.	Transketolase.	0.876
NEQG_00197	NEQG_02449	I3EJN0	I3EDM9	PfkB domain-containing protein.	Fructose-bisphosphate aldolase class-I.	0.787
NEQG_00197	NEQG_02598	I3EJN0	I3EDG6	PfkB domain-containing protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.854
NEQG_00245	NEQG_00197	I3EJS8	I3EJN0	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	PfkB domain-containing protein.	0.448
NEQG_00245	NEQG_00301	I3EJS8	I3EJY4	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	Uncharacterized protein.	0.988
NEQG_00245	NEQG_00421	I3EJS8	I3EKA4	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	Uncharacterized protein.	0.957
NEQG_00245	NEQG_00552	I3EJS8	I3EKN5	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	Enolase_N domain-containing protein.	0.743
NEQG_00245	NEQG_00560	I3EJS8	I3EKP3	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.	0.752
NEQG_00245	NEQG_00819	I3EJS8	I3EIF3	6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.	Glucosamine_iso domain-containing protein.	0.954