(9 nodes) Estrogen-dependent gene expression network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_02613	DNA-directed RNA polymerase II. (75 aa)
	NEQG_01627	RPOL4c domain-containing protein. (116 aa)
	NEQG_01666	Uncharacterized protein. (134 aa)
	NEQG_01314	RNA_pol_L_2 domain-containing protein. (97 aa)
	NEQG_01320	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1137 aa)
	NEQG_00676	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. (254 aa)
	NEQG_00100	RPOL9 domain-containing protein. (123 aa)
	NEQG_00486	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1612 aa)
	NEQG_00539	Uncharacterized protein. (170 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00100	NEQG_00486	I3EJD3	I3EKG9	RPOL9 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00100	NEQG_00539	I3EJD3	I3EKM2	RPOL9 domain-containing protein.	Uncharacterized protein.	0.999
NEQG_00100	NEQG_00676	I3EJD3	I3EI10	RPOL9 domain-containing protein.	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.	0.999
NEQG_00100	NEQG_01314	I3EJD3	I3EHC7	RPOL9 domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
NEQG_00100	NEQG_01320	I3EJD3	I3EHD3	RPOL9 domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00100	NEQG_01627	I3EJD3	I3EG36	RPOL9 domain-containing protein.	RPOL4c domain-containing protein.	0.999
NEQG_00100	NEQG_01666	I3EJD3	I3EG75	RPOL9 domain-containing protein.	Uncharacterized protein.	0.999
NEQG_00100	NEQG_02613	I3EJD3	I3EDI1	RPOL9 domain-containing protein.	DNA-directed RNA polymerase II.	0.999
NEQG_00486	NEQG_00100	I3EKG9	I3EJD3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RPOL9 domain-containing protein.	0.999
NEQG_00486	NEQG_00539	I3EKG9	I3EKM2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
NEQG_00486	NEQG_00676	I3EKG9	I3EI10	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.	0.999
NEQG_00486	NEQG_01314	I3EKG9	I3EHC7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA_pol_L_2 domain-containing protein.	0.999
NEQG_00486	NEQG_01320	I3EKG9	I3EHD3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00486	NEQG_01627	I3EKG9	I3EG36	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RPOL4c domain-containing protein.	0.999
NEQG_00486	NEQG_01666	I3EKG9	I3EG75	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
NEQG_00486	NEQG_02613	I3EKG9	I3EDI1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II.	0.999
NEQG_00539	NEQG_00100	I3EKM2	I3EJD3	Uncharacterized protein.	RPOL9 domain-containing protein.	0.999
NEQG_00539	NEQG_00486	I3EKM2	I3EKG9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00539	NEQG_00676	I3EKM2	I3EI10	Uncharacterized protein.	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.	0.999
NEQG_00539	NEQG_01314	I3EKM2	I3EHC7	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999