(5 nodes) Ino80 complex, and Actin network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_01453	Uncharacterized protein. (187 aa)
	NEQG_01477	Uncharacterized protein. (860 aa)
	NEQG_01112	Uncharacterized protein; Belongs to the actin family. (607 aa)
	NEQG_01254	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (441 aa)
	NEQG_00320	YL1_C domain-containing protein. (93 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00320	NEQG_01112	I3EK03	I3EGS5	YL1_C domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.995
NEQG_00320	NEQG_01254	I3EK03	I3EH67	YL1_C domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.948
NEQG_00320	NEQG_01453	I3EK03	I3EFL2	YL1_C domain-containing protein.	Uncharacterized protein.	0.733
NEQG_00320	NEQG_01477	I3EK03	I3EFN6	YL1_C domain-containing protein.	Uncharacterized protein.	0.791
NEQG_01112	NEQG_00320	I3EGS5	I3EK03	Uncharacterized protein; Belongs to the actin family.	YL1_C domain-containing protein.	0.995
NEQG_01112	NEQG_01254	I3EGS5	I3EH67	Uncharacterized protein; Belongs to the actin family.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.983
NEQG_01112	NEQG_01453	I3EGS5	I3EFL2	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.790
NEQG_01112	NEQG_01477	I3EGS5	I3EFN6	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.810
NEQG_01254	NEQG_00320	I3EH67	I3EK03	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	YL1_C domain-containing protein.	0.948
NEQG_01254	NEQG_01112	I3EH67	I3EGS5	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein; Belongs to the actin family.	0.983
NEQG_01254	NEQG_01453	I3EH67	I3EFL2	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.582
NEQG_01254	NEQG_01477	I3EH67	I3EFN6	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein.	0.874
NEQG_01453	NEQG_00320	I3EFL2	I3EK03	Uncharacterized protein.	YL1_C domain-containing protein.	0.733
NEQG_01453	NEQG_01112	I3EFL2	I3EGS5	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.790
NEQG_01453	NEQG_01254	I3EFL2	I3EH67	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.582
NEQG_01453	NEQG_01477	I3EFL2	I3EFN6	Uncharacterized protein.	Uncharacterized protein.	0.663
NEQG_01477	NEQG_00320	I3EFN6	I3EK03	Uncharacterized protein.	YL1_C domain-containing protein.	0.791
NEQG_01477	NEQG_01112	I3EFN6	I3EGS5	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.810
NEQG_01477	NEQG_01254	I3EFN6	I3EH67	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.874
NEQG_01477	NEQG_01453	I3EFN6	I3EFL2	Uncharacterized protein.	Uncharacterized protein.	0.663