(6 nodes) DNA replication initiation network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_02237	DNA_pol_E_B domain-containing protein. (385 aa)
	NEQG_01521	Uncharacterized protein. (373 aa)
	NEQG_01721	Uncharacterized protein. (411 aa)
	NEQG_01272	Uncharacterized protein. (284 aa)
	NEQG_01364	DNA polymerase. (641 aa)
	NEQG_00831	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (863 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00831	NEQG_01272	I3EIG5	I3EH85	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	Uncharacterized protein.	0.930
NEQG_00831	NEQG_01364	I3EIG5	I3EHH7	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	DNA polymerase.	0.972
NEQG_00831	NEQG_01521	I3EIG5	I3EFT0	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	Uncharacterized protein.	0.933
NEQG_00831	NEQG_01721	I3EIG5	I3EGD0	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	Uncharacterized protein.	0.999
NEQG_00831	NEQG_02237	I3EIG5	I3EEP3	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	DNA_pol_E_B domain-containing protein.	0.926
NEQG_01272	NEQG_00831	I3EH85	I3EIG5	Uncharacterized protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.930
NEQG_01272	NEQG_01364	I3EH85	I3EHH7	Uncharacterized protein.	DNA polymerase.	0.996
NEQG_01272	NEQG_01521	I3EH85	I3EFT0	Uncharacterized protein.	Uncharacterized protein.	0.999
NEQG_01272	NEQG_01721	I3EH85	I3EGD0	Uncharacterized protein.	Uncharacterized protein.	0.874
NEQG_01272	NEQG_02237	I3EH85	I3EEP3	Uncharacterized protein.	DNA_pol_E_B domain-containing protein.	0.996
NEQG_01364	NEQG_00831	I3EHH7	I3EIG5	DNA polymerase.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.972
NEQG_01364	NEQG_01272	I3EHH7	I3EH85	DNA polymerase.	Uncharacterized protein.	0.996
NEQG_01364	NEQG_01521	I3EHH7	I3EFT0	DNA polymerase.	Uncharacterized protein.	0.998
NEQG_01364	NEQG_01721	I3EHH7	I3EGD0	DNA polymerase.	Uncharacterized protein.	0.961
NEQG_01364	NEQG_02237	I3EHH7	I3EEP3	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.999
NEQG_01521	NEQG_00831	I3EFT0	I3EIG5	Uncharacterized protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.933
NEQG_01521	NEQG_01272	I3EFT0	I3EH85	Uncharacterized protein.	Uncharacterized protein.	0.999
NEQG_01521	NEQG_01364	I3EFT0	I3EHH7	Uncharacterized protein.	DNA polymerase.	0.998
NEQG_01521	NEQG_01721	I3EFT0	I3EGD0	Uncharacterized protein.	Uncharacterized protein.	0.905
NEQG_01521	NEQG_02237	I3EFT0	I3EEP3	Uncharacterized protein.	DNA_pol_E_B domain-containing protein.	0.998