(20 nodes) Histone modification network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_00262	PHD-type domain-containing protein. (191 aa)
	NEQG_00053	Uncharacterized protein. (430 aa)
	NEQG_01033	Bromo domain-containing protein. (459 aa)
	NEQG_00965	Atypical/PIKK/TRRAP protein kinase; Belongs to the PI3/PI4-kinase family. (3241 aa)
	NEQG_00825	Bromo domain-containing protein. (880 aa)
	NEQG_00597	Histone deacetylase. (369 aa)
	NEQG_01409	Uncharacterized protein. (370 aa)
	NEQG_01376	Uncharacterized protein. (295 aa)
	NEQG_01224	SCA7 domain-containing protein. (197 aa)
	NEQG_01197	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (427 aa)
	NEQG_01714	Deacetylase sirtuin-type domain-containing protein. (328 aa)
	NEQG_01884	Uncharacterized protein; Belongs to the actin family. (371 aa)
	NEQG_01824	MRG domain-containing protein. (259 aa)
	NEQG_02230	E3 ubiquitin protein ligase. (480 aa)
	NEQG_02200	Atypical/PIKK/ATM protein kinase. (831 aa)
	NEQG_00485	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (361 aa)
	NEQG_00279	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (400 aa)
	NEQG_02397	USP domain-containing protein; Belongs to the peptidase C19 family. (401 aa)
	NEQG_02351	Uncharacterized protein. (258 aa)
	NEQG_02596	Uncharacterized protein. (262 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00053	NEQG_00597	I3EJ86	I3EHT1	Uncharacterized protein.	Histone deacetylase.	0.789
NEQG_00053	NEQG_00825	I3EJ86	I3EIF9	Uncharacterized protein.	Bromo domain-containing protein.	0.652
NEQG_00053	NEQG_00965	I3EJ86	I3EIU9	Uncharacterized protein.	Atypical/PIKK/TRRAP protein kinase; Belongs to the PI3/PI4-kinase family.	0.540
NEQG_00053	NEQG_01033	I3EJ86	I3EJ17	Uncharacterized protein.	Bromo domain-containing protein.	0.449
NEQG_00053	NEQG_01197	I3EJ86	I3EH10	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.853
NEQG_00053	NEQG_01224	I3EJ86	I3EH37	Uncharacterized protein.	SCA7 domain-containing protein.	0.530
NEQG_00053	NEQG_01376	I3EJ86	I3EHI9	Uncharacterized protein.	Uncharacterized protein.	0.773
NEQG_00053	NEQG_01409	I3EJ86	I3EHM2	Uncharacterized protein.	Uncharacterized protein.	0.449
NEQG_00053	NEQG_01714	I3EJ86	I3EGC3	Uncharacterized protein.	Deacetylase sirtuin-type domain-containing protein.	0.403
NEQG_00053	NEQG_01884	I3EJ86	I3EF15	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.427
NEQG_00053	NEQG_02351	I3EJ86	I3EE23	Uncharacterized protein.	Uncharacterized protein.	0.532
NEQG_00053	NEQG_02397	I3EJ86	I3EE69	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.626
NEQG_00262	NEQG_00279	I3EJU5	I3EJW2	PHD-type domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.719
NEQG_00262	NEQG_00485	I3EJU5	I3EKG8	PHD-type domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.719
NEQG_00262	NEQG_00597	I3EJU5	I3EHT1	PHD-type domain-containing protein.	Histone deacetylase.	0.597
NEQG_00262	NEQG_00825	I3EJU5	I3EIF9	PHD-type domain-containing protein.	Bromo domain-containing protein.	0.523
NEQG_00262	NEQG_00965	I3EJU5	I3EIU9	PHD-type domain-containing protein.	Atypical/PIKK/TRRAP protein kinase; Belongs to the PI3/PI4-kinase family.	0.719
NEQG_00262	NEQG_01197	I3EJU5	I3EH10	PHD-type domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.639
NEQG_00262	NEQG_01824	I3EJU5	I3EEV5	PHD-type domain-containing protein.	MRG domain-containing protein.	0.656
NEQG_00262	NEQG_01884	I3EJU5	I3EF15	PHD-type domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.581