(30 nodes) Nucleotidyltransferase activity network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_00531	Uncharacterized protein. (342 aa)
	NEQG_00486	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1612 aa)
	NEQG_00318	Uncharacterized protein. (208 aa)
	NEQG_00296	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1379 aa)
	NEQG_00137	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (506 aa)
	NEQG_00933	Uncharacterized protein. (122 aa)
	NEQG_00877	Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. (344 aa)
	NEQG_00873	ATP_bind_3 domain-containing protein. (307 aa)
	NEQG_00831	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (863 aa)
	NEQG_00740	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1284 aa)
	NEQG_00676	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. (254 aa)
	NEQG_00621	Phosphate cytidylyltransferase 1. (215 aa)
	NEQG_01391	Uncharacterized protein. (174 aa)
	NEQG_01364	DNA polymerase. (641 aa)
	NEQG_01320	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1137 aa)
	NEQG_01272	Uncharacterized protein. (284 aa)
	NEQG_01267	tRNA-nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (458 aa)
	NEQG_01208	Uncharacterized protein. (620 aa)
	NEQG_01177	DNA_pol_D_N domain-containing protein. (388 aa)
	NEQG_01717	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1143 aa)
	NEQG_01680	UTP--glucose-1-phosphate uridylyltransferase. (504 aa)
	NEQG_01994	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. (297 aa)
	NEQG_01955	Mannose-1-phosphate guanyltransferase. (363 aa)
	NEQG_01895	Uncharacterized protein. (230 aa)
	NEQG_02205	Uncharacterized protein. (382 aa)
	NEQG_02107	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1089 aa)
	NEQG_02396	Phosphatidate cytidylyltransferase. (345 aa)
	NEQG_02373	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (911 aa)
	NEQG_02613	DNA-directed RNA polymerase II. (75 aa)
	NEQG_01314	RNA_pol_L_2 domain-containing protein. (97 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00296	NEQG_00318	I3EJX9	I3EK01	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
NEQG_00296	NEQG_00676	I3EJX9	I3EI10	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.	0.954
NEQG_00296	NEQG_00740	I3EJX9	I3EI74	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.865
NEQG_00296	NEQG_00933	I3EJX9	I3EIR7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
NEQG_00296	NEQG_01320	I3EJX9	I3EHD3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.948
NEQG_00296	NEQG_01391	I3EJX9	I3EHK4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.901
NEQG_00296	NEQG_01717	I3EJX9	I3EGC6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00296	NEQG_01895	I3EJX9	I3EF26	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.941
NEQG_00296	NEQG_01994	I3EJX9	I3EFC5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.	0.999
NEQG_00296	NEQG_02107	I3EJX9	I3EEB3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.973
NEQG_00296	NEQG_02613	I3EJX9	I3EDI1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II.	0.999
NEQG_00318	NEQG_00296	I3EK01	I3EJX9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00318	NEQG_00486	I3EK01	I3EKG9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00318	NEQG_00676	I3EK01	I3EI10	Uncharacterized protein.	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.	0.999
NEQG_00318	NEQG_00740	I3EK01	I3EI74	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00318	NEQG_00933	I3EK01	I3EIR7	Uncharacterized protein.	Uncharacterized protein.	0.999
NEQG_00318	NEQG_01314	I3EK01	I3EHC7	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
NEQG_00318	NEQG_01320	I3EK01	I3EHD3	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
NEQG_00318	NEQG_01391	I3EK01	I3EHK4	Uncharacterized protein.	Uncharacterized protein.	0.998
NEQG_00318	NEQG_01717	I3EK01	I3EGC6	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999