(32 nodes) Signaling network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_00249	Calponin-homology (CH) domain-containing protein. (876 aa)
	NEQG_00274	IRE protein kinase. (677 aa)
	NEQG_00449	Uncharacterized protein. (267 aa)
	NEQG_00501	Uncharacterized protein. (102 aa)
	NEQG_02565	AGC/PKC protein kinase. (350 aa)
	NEQG_02450	Serine/threonine protein kinase. (525 aa)
	NEQG_02184	CMGC/GSK protein kinase; Belongs to the protein kinase superfamily. (305 aa)
	NEQG_02200	Atypical/PIKK/ATM protein kinase. (831 aa)
	NEQG_02244	RRM_2 domain-containing protein. (277 aa)
	NEQG_02030	Uncharacterized protein. (621 aa)
	NEQG_02065	Rho GTPase. (196 aa)
	NEQG_01481	Serine/threonine-protein phosphatase. (204 aa)
	NEQG_01583	OTU domain-containing protein. (238 aa)
	NEQG_01638	Uncharacterized protein. (311 aa)
	NEQG_01650	Uncharacterized protein. (678 aa)
	NEQG_01780	Uncharacterized protein. (190 aa)
	NEQG_01788	TTK protein kinase. (761 aa)
	NEQG_01200	AN1-type domain-containing protein. (92 aa)
	NEQG_01390	Serine/threonine protein kinase. (206 aa)
	NEQG_01444	Uncharacterized protein. (144 aa)
	NEQG_00661	CAMK/CAMKL protein kinase. (306 aa)
	NEQG_00786	14-3-3 family protein beta/alpha; Belongs to the 14-3-3 family. (251 aa)
	NEQG_00801	SCP domain-containing protein. (377 aa)
	NEQG_00810	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (547 aa)
	NEQG_00945	Uncharacterized protein. (385 aa)
	NEQG_00999	WD_REPEATS_REGION domain-containing protein. (321 aa)
	NEQG_00011	Uncharacterized protein. (378 aa)
	NEQG_00024	Atypical/PIKK protein kinase; Belongs to the PI3/PI4-kinase family. (1468 aa)
	NEQG_00075	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (464 aa)
	NEQG_00101	Fip1 domain-containing protein. (85 aa)
	NEQG_00236	Uncharacterized protein. (606 aa)
	NEQG_00244	CK1/CK1 protein kinase; Belongs to the protein kinase superfamily. (361 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00011	NEQG_00274	I3EJ44	I3EJV7	Uncharacterized protein.	IRE protein kinase.	0.815
NEQG_00011	NEQG_02184	I3EJ44	I3EEJ0	Uncharacterized protein.	CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.	0.815
NEQG_00024	NEQG_00801	I3EJ57	I3EID5	Atypical/PIKK protein kinase; Belongs to the PI3/PI4-kinase family.	SCP domain-containing protein.	0.787
NEQG_00024	NEQG_00810	I3EJ57	I3EIE4	Atypical/PIKK protein kinase; Belongs to the PI3/PI4-kinase family.	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.944
NEQG_00075	NEQG_00236	I3EJA8	I3EJR9	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.429
NEQG_00075	NEQG_00786	I3EJA8	I3EIC0	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	14-3-3 family protein beta/alpha; Belongs to the 14-3-3 family.	0.679
NEQG_00075	NEQG_01200	I3EJA8	I3EH13	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	AN1-type domain-containing protein.	0.416
NEQG_00075	NEQG_01780	I3EJA8	I3EGI9	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Uncharacterized protein.	0.647
NEQG_00075	NEQG_02065	I3EJA8	I3EFJ6	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	Rho GTPase.	0.647
NEQG_00101	NEQG_00274	I3EJD4	I3EJV7	Fip1 domain-containing protein.	IRE protein kinase.	0.785
NEQG_00101	NEQG_01780	I3EJD4	I3EGI9	Fip1 domain-containing protein.	Uncharacterized protein.	0.809
NEQG_00101	NEQG_02065	I3EJD4	I3EFJ6	Fip1 domain-containing protein.	Rho GTPase.	0.809
NEQG_00101	NEQG_02184	I3EJD4	I3EEJ0	Fip1 domain-containing protein.	CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.	0.784
NEQG_00236	NEQG_00075	I3EJR9	I3EJA8	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.429
NEQG_00236	NEQG_00274	I3EJR9	I3EJV7	Uncharacterized protein.	IRE protein kinase.	0.782
NEQG_00236	NEQG_00449	I3EJR9	I3EKD2	Uncharacterized protein.	Uncharacterized protein.	0.655
NEQG_00236	NEQG_00786	I3EJR9	I3EIC0	Uncharacterized protein.	14-3-3 family protein beta/alpha; Belongs to the 14-3-3 family.	0.521
NEQG_00236	NEQG_00801	I3EJR9	I3EID5	Uncharacterized protein.	SCP domain-containing protein.	0.818
NEQG_00236	NEQG_01481	I3EJR9	I3EFP0	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.902
NEQG_00236	NEQG_02184	I3EJR9	I3EEJ0	Uncharacterized protein.	CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.	0.810