(7 nodes) Cell projection network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_00236	Uncharacterized protein. (606 aa)
	NEQG_02183	Uncharacterized protein. (513 aa)
	NEQG_01860	FH2 domain-containing protein. (1085 aa)
	NEQG_02065	Rho GTPase. (196 aa)
	NEQG_01780	Uncharacterized protein. (190 aa)
	NEQG_01372	Uncharacterized protein. (184 aa)
	NEQG_00932	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (537 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00932	NEQG_01372	I3EIR6	I3EHI5	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.431
NEQG_00932	NEQG_01780	I3EIR6	I3EGI9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.431
NEQG_00932	NEQG_02065	I3EIR6	I3EFJ6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Rho GTPase.	0.431
NEQG_01372	NEQG_00932	I3EHI5	I3EIR6	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.431
NEQG_01372	NEQG_01860	I3EHI5	I3EEZ1	Uncharacterized protein.	FH2 domain-containing protein.	0.801
NEQG_01372	NEQG_02183	I3EHI5	I3EEI9	Uncharacterized protein.	Uncharacterized protein.	0.444
NEQG_01780	NEQG_00932	I3EGI9	I3EIR6	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.431
NEQG_01780	NEQG_01860	I3EGI9	I3EEZ1	Uncharacterized protein.	FH2 domain-containing protein.	0.912
NEQG_01780	NEQG_02183	I3EGI9	I3EEI9	Uncharacterized protein.	Uncharacterized protein.	0.571
NEQG_01860	NEQG_01372	I3EEZ1	I3EHI5	FH2 domain-containing protein.	Uncharacterized protein.	0.801
NEQG_01860	NEQG_01780	I3EEZ1	I3EGI9	FH2 domain-containing protein.	Uncharacterized protein.	0.912
NEQG_01860	NEQG_02065	I3EEZ1	I3EFJ6	FH2 domain-containing protein.	Rho GTPase.	0.912
NEQG_02065	NEQG_00932	I3EFJ6	I3EIR6	Rho GTPase.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.431
NEQG_02065	NEQG_01860	I3EFJ6	I3EEZ1	Rho GTPase.	FH2 domain-containing protein.	0.912
NEQG_02065	NEQG_02183	I3EFJ6	I3EEI9	Rho GTPase.	Uncharacterized protein.	0.571
NEQG_02183	NEQG_01372	I3EEI9	I3EHI5	Uncharacterized protein.	Uncharacterized protein.	0.444
NEQG_02183	NEQG_01780	I3EEI9	I3EGI9	Uncharacterized protein.	Uncharacterized protein.	0.571
NEQG_02183	NEQG_02065	I3EEI9	I3EFJ6	Uncharacterized protein.	Rho GTPase.	0.571