(10 nodes) SWI/SNF superfamily-type complex network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_01477	Uncharacterized protein. (860 aa)
	NEQG_01709	Uncharacterized protein. (503 aa)
	NEQG_01112	Uncharacterized protein; Belongs to the actin family. (607 aa)
	NEQG_02605	Uncharacterized protein. (185 aa)
	NEQG_01154	Uncharacterized protein. (1034 aa)
	NEQG_00956	Transcription activator. (638 aa)
	NEQG_00320	YL1_C domain-containing protein. (93 aa)
	NEQG_00370	Galectin domain-containing protein. (242 aa)
	NEQG_01884	Uncharacterized protein; Belongs to the actin family. (371 aa)
	NEQG_00776	Uncharacterized protein. (552 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00320	NEQG_00956	I3EK03	I3EIU0	YL1_C domain-containing protein.	Transcription activator.	0.599
NEQG_00320	NEQG_01112	I3EK03	I3EGS5	YL1_C domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.995
NEQG_00320	NEQG_01477	I3EK03	I3EFN6	YL1_C domain-containing protein.	Uncharacterized protein.	0.791
NEQG_00320	NEQG_01884	I3EK03	I3EF15	YL1_C domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.863
NEQG_00320	NEQG_02605	I3EK03	I3EDH3	YL1_C domain-containing protein.	Uncharacterized protein.	0.610
NEQG_00370	NEQG_00776	I3EK53	I3EIB0	Galectin domain-containing protein.	Uncharacterized protein.	0.998
NEQG_00370	NEQG_00956	I3EK53	I3EIU0	Galectin domain-containing protein.	Transcription activator.	0.483
NEQG_00370	NEQG_01154	I3EK53	I3EGW7	Galectin domain-containing protein.	Uncharacterized protein.	0.994
NEQG_00370	NEQG_01884	I3EK53	I3EF15	Galectin domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.987
NEQG_00370	NEQG_02605	I3EK53	I3EDH3	Galectin domain-containing protein.	Uncharacterized protein.	0.445
NEQG_00776	NEQG_00370	I3EIB0	I3EK53	Uncharacterized protein.	Galectin domain-containing protein.	0.998
NEQG_00776	NEQG_00956	I3EIB0	I3EIU0	Uncharacterized protein.	Transcription activator.	0.526
NEQG_00776	NEQG_01154	I3EIB0	I3EGW7	Uncharacterized protein.	Uncharacterized protein.	0.993
NEQG_00776	NEQG_01884	I3EIB0	I3EF15	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.984
NEQG_00776	NEQG_02605	I3EIB0	I3EDH3	Uncharacterized protein.	Uncharacterized protein.	0.409
NEQG_00956	NEQG_00320	I3EIU0	I3EK03	Transcription activator.	YL1_C domain-containing protein.	0.599
NEQG_00956	NEQG_00370	I3EIU0	I3EK53	Transcription activator.	Galectin domain-containing protein.	0.483
NEQG_00956	NEQG_00776	I3EIU0	I3EIB0	Transcription activator.	Uncharacterized protein.	0.526
NEQG_00956	NEQG_01112	I3EIU0	I3EGS5	Transcription activator.	Uncharacterized protein; Belongs to the actin family.	0.629
NEQG_00956	NEQG_01154	I3EIU0	I3EGW7	Transcription activator.	Uncharacterized protein.	0.569