(30 nodes) Zinc finger, RING/FYVE/PHD-type network (Nematocida parisii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NEQG_02235	Uncharacterized protein. (614 aa)
	NEQG_00367	U-box domain-containing protein. (851 aa)
	NEQG_00339	Uncharacterized protein. (93 aa)
	NEQG_00281	Uncharacterized protein. (165 aa)
	NEQG_00262	PHD-type domain-containing protein. (191 aa)
	NEQG_00016	RING-type domain-containing protein. (384 aa)
	NEQG_00994	RING-type domain-containing protein. (242 aa)
	NEQG_00895	RING-type domain-containing protein. (213 aa)
	NEQG_00739	Uncharacterized protein. (263 aa)
	NEQG_00726	RING-CH-type domain-containing protein. (852 aa)
	NEQG_00704	RING-type domain-containing protein. (145 aa)
	NEQG_00638	RING-type domain-containing protein. (192 aa)
	NEQG_01442	RING-type domain-containing protein. (205 aa)
	NEQG_01433	RING-type domain-containing protein. (309 aa)
	NEQG_01386	RING-type domain-containing protein. (1069 aa)
	NEQG_01317	RING-CH-type domain-containing protein. (314 aa)
	NEQG_01301	RING-type domain-containing protein. (173 aa)
	NEQG_01195	RING-type domain-containing protein. (259 aa)
	NEQG_01162	Ring-box protein 1. (90 aa)
	NEQG_01750	HTH TFE/IIEalpha-type domain-containing protein. (310 aa)
	NEQG_01592	UBP-type domain-containing protein. (568 aa)
	NEQG_02397	USP domain-containing protein; Belongs to the peptidase C19 family. (401 aa)
	NEQG_01590	Ubiquitinyl hydrolase 1. (589 aa)
	NEQG_02540	RING-type domain-containing protein. (356 aa)
	NEQG_02230	E3 ubiquitin protein ligase. (480 aa)
	NEQG_02147	RING-type domain-containing protein. (86 aa)
	NEQG_01821	Uncharacterized protein. (733 aa)
	NEQG_01898	RING-type domain-containing protein. (657 aa)
	NEQG_01939	PHD domain-containing protein. (196 aa)
	NEQG_01974	RING-type domain-containing protein. (516 aa)

Your Current Organism:

Nematocida parisii

NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEQG_00016	NEQG_00704	I3EJ49	I3EI38	RING-type domain-containing protein.	RING-type domain-containing protein.	0.478
NEQG_00016	NEQG_00726	I3EJ49	I3EI60	RING-type domain-containing protein.	RING-CH-type domain-containing protein.	0.747
NEQG_00016	NEQG_01317	I3EJ49	I3EHD0	RING-type domain-containing protein.	RING-CH-type domain-containing protein.	0.560
NEQG_00262	NEQG_02235	I3EJU5	I3EEP1	PHD-type domain-containing protein.	Uncharacterized protein.	0.768
NEQG_00704	NEQG_00016	I3EI38	I3EJ49	RING-type domain-containing protein.	RING-type domain-containing protein.	0.478
NEQG_00726	NEQG_00016	I3EI60	I3EJ49	RING-CH-type domain-containing protein.	RING-type domain-containing protein.	0.747
NEQG_00895	NEQG_01162	I3EIM9	I3EGX5	RING-type domain-containing protein.	Ring-box protein 1.	0.612
NEQG_00895	NEQG_01750	I3EIM9	I3EGF9	RING-type domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.990
NEQG_01162	NEQG_00895	I3EGX5	I3EIM9	Ring-box protein 1.	RING-type domain-containing protein.	0.612
NEQG_01162	NEQG_01195	I3EGX5	I3EH08	Ring-box protein 1.	RING-type domain-containing protein.	0.415
NEQG_01162	NEQG_02147	I3EGX5	I3EEF3	Ring-box protein 1.	RING-type domain-containing protein.	0.520
NEQG_01195	NEQG_01162	I3EH08	I3EGX5	RING-type domain-containing protein.	Ring-box protein 1.	0.415
NEQG_01317	NEQG_00016	I3EHD0	I3EJ49	RING-CH-type domain-containing protein.	RING-type domain-containing protein.	0.560
NEQG_01386	NEQG_01974	I3EHJ9	I3EFA5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.533
NEQG_01750	NEQG_00895	I3EGF9	I3EIM9	HTH TFE/IIEalpha-type domain-containing protein.	RING-type domain-containing protein.	0.990
NEQG_01939	NEQG_02235	I3EF70	I3EEP1	PHD domain-containing protein.	Uncharacterized protein.	0.737
NEQG_01974	NEQG_01386	I3EFA5	I3EHJ9	RING-type domain-containing protein.	RING-type domain-containing protein.	0.533
NEQG_02147	NEQG_01162	I3EEF3	I3EGX5	RING-type domain-containing protein.	Ring-box protein 1.	0.520
NEQG_02230	NEQG_02397	I3EEN6	I3EE69	E3 ubiquitin protein ligase.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.515
NEQG_02235	NEQG_00262	I3EEP1	I3EJU5	Uncharacterized protein.	PHD-type domain-containing protein.	0.768