STRINGSTRING
NEQG_00478 NEQG_00478 NEQG_00147 NEQG_00147 NEQG_00956 NEQG_00956 NEQG_00697 NEQG_00697 NEQG_01377 NEQG_01377 NEQG_01254 NEQG_01254 NEQG_01167 NEQG_01167 NEQG_01850 NEQG_01850 NEQG_02098 NEQG_02098 NEQG_02373 NEQG_02373
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NEQG_00478Ribosomal_L7Ae domain-containing protein. (108 aa)
NEQG_00147RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (422 aa)
NEQG_00956Transcription activator. (638 aa)
NEQG_00697Uncharacterized protein; Belongs to the histone H2B family. (133 aa)
NEQG_01377Centromere/microtubule-binding protein CBF5. (422 aa)
NEQG_01254RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (441 aa)
NEQG_01167Uncharacterized protein. (573 aa)
NEQG_01850H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (213 aa)
NEQG_02098ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (861 aa)
NEQG_02373Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (911 aa)
Your Current Organism:
Nematocida parisii
NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3
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