8 items (Psilocybe cyanescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_005672	Uncharacterized protein. (707 aa)
	CVT25_001009	Uncharacterized protein. (240 aa)
	CVT25_011229	SLATT_fungal domain-containing protein. (297 aa)
	CVT25_008332	Uncharacterized protein. (569 aa)
	CVT25_005253	Uncharacterized protein. (408 aa)
	CVT25_001266	Uncharacterized protein. (1483 aa)
	CVT25_014093	Uncharacterized protein. (1014 aa)
	CVT25_006156	Uncharacterized protein. (196 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_001009	CVT25_001266	A0A409W9Q1	A0A409XEY4	Uncharacterized protein.	Uncharacterized protein.	0.456
CVT25_001009	CVT25_005253	A0A409W9Q1	A0A409WWW3	Uncharacterized protein.	Uncharacterized protein.	0.458
CVT25_001009	CVT25_005672	A0A409W9Q1	A0A409VLC8	Uncharacterized protein.	Uncharacterized protein.	0.609
CVT25_001009	CVT25_006156	A0A409W9Q1	A0A409XH05	Uncharacterized protein.	Uncharacterized protein.	0.621
CVT25_001009	CVT25_008332	A0A409W9Q1	A0A409WV89	Uncharacterized protein.	Uncharacterized protein.	0.621
CVT25_001009	CVT25_014093	A0A409W9Q1	A0A409XFY4	Uncharacterized protein.	Uncharacterized protein.	0.609
CVT25_001266	CVT25_001009	A0A409XEY4	A0A409W9Q1	Uncharacterized protein.	Uncharacterized protein.	0.456
CVT25_001266	CVT25_005672	A0A409XEY4	A0A409VLC8	Uncharacterized protein.	Uncharacterized protein.	0.782
CVT25_001266	CVT25_006156	A0A409XEY4	A0A409XH05	Uncharacterized protein.	Uncharacterized protein.	0.456
CVT25_001266	CVT25_008332	A0A409XEY4	A0A409WV89	Uncharacterized protein.	Uncharacterized protein.	0.456
CVT25_001266	CVT25_011229	A0A409XEY4	A0A409WGF4	Uncharacterized protein.	SLATT_fungal domain-containing protein.	0.456
CVT25_001266	CVT25_014093	A0A409XEY4	A0A409XFY4	Uncharacterized protein.	Uncharacterized protein.	0.782
CVT25_005253	CVT25_001009	A0A409WWW3	A0A409W9Q1	Uncharacterized protein.	Uncharacterized protein.	0.458
CVT25_005253	CVT25_005672	A0A409WWW3	A0A409VLC8	Uncharacterized protein.	Uncharacterized protein.	0.799
CVT25_005253	CVT25_006156	A0A409WWW3	A0A409XH05	Uncharacterized protein.	Uncharacterized protein.	0.458
CVT25_005253	CVT25_008332	A0A409WWW3	A0A409WV89	Uncharacterized protein.	Uncharacterized protein.	0.458
CVT25_005253	CVT25_011229	A0A409WWW3	A0A409WGF4	Uncharacterized protein.	SLATT_fungal domain-containing protein.	0.458
CVT25_005253	CVT25_014093	A0A409WWW3	A0A409XFY4	Uncharacterized protein.	Uncharacterized protein.	0.799
CVT25_005672	CVT25_001009	A0A409VLC8	A0A409W9Q1	Uncharacterized protein.	Uncharacterized protein.	0.609
CVT25_005672	CVT25_001266	A0A409VLC8	A0A409XEY4	Uncharacterized protein.	Uncharacterized protein.	0.782