(10 nodes) RNA polymerase II, core complex network (Psilocybe cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_005731	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1239 aa)
	CVT25_005724	Uncharacterized protein. (169 aa)
	CVT25_005896	RPOLD domain-containing protein. (379 aa)
	CVT25_008398	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1752 aa)
	CVT25_010907	Uncharacterized protein. (71 aa)
	CVT25_011624	RPOL4c domain-containing protein. (137 aa)
	CVT25_002966	Uncharacterized protein. (170 aa)
	CVT25_010530	Uncharacterized protein. (74 aa)
	CVT25_008536	TFIIS-type domain-containing protein. (99 aa)
	CVT25_001296	RNA_pol_L_2 domain-containing protein. (150 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_001296	CVT25_002966	A0A409XF03	A0A409WMT6	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
CVT25_001296	CVT25_005724	A0A409XF03	A0A409VLL7	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999
CVT25_001296	CVT25_005731	A0A409XF03	A0A409VLJ4	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
CVT25_001296	CVT25_005896	A0A409XF03	A0A409VM16	RNA_pol_L_2 domain-containing protein.	RPOLD domain-containing protein.	0.998
CVT25_001296	CVT25_008398	A0A409XF03	A0A409VQC2	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
CVT25_001296	CVT25_008536	A0A409XF03	A0A409X9Z5	RNA_pol_L_2 domain-containing protein.	TFIIS-type domain-containing protein.	0.999
CVT25_001296	CVT25_010530	A0A409XF03	A0A409X2J8	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999
CVT25_001296	CVT25_010907	A0A409XF03	A0A409WFP7	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.998
CVT25_001296	CVT25_011624	A0A409XF03	A0A409WIU8	RNA_pol_L_2 domain-containing protein.	RPOL4c domain-containing protein.	0.998
CVT25_002966	CVT25_001296	A0A409WMT6	A0A409XF03	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.998
CVT25_002966	CVT25_005724	A0A409WMT6	A0A409VLL7	Uncharacterized protein.	Uncharacterized protein.	0.998
CVT25_002966	CVT25_005731	A0A409WMT6	A0A409VLJ4	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
CVT25_002966	CVT25_005896	A0A409WMT6	A0A409VM16	Uncharacterized protein.	RPOLD domain-containing protein.	0.998
CVT25_002966	CVT25_008398	A0A409WMT6	A0A409VQC2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
CVT25_002966	CVT25_008536	A0A409WMT6	A0A409X9Z5	Uncharacterized protein.	TFIIS-type domain-containing protein.	0.998
CVT25_002966	CVT25_010530	A0A409WMT6	A0A409X2J8	Uncharacterized protein.	Uncharacterized protein.	0.998
CVT25_002966	CVT25_010907	A0A409WMT6	A0A409WFP7	Uncharacterized protein.	Uncharacterized protein.	0.998
CVT25_002966	CVT25_011624	A0A409WMT6	A0A409WIU8	Uncharacterized protein.	RPOL4c domain-containing protein.	0.998
CVT25_005724	CVT25_001296	A0A409VLL7	A0A409XF03	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
CVT25_005724	CVT25_002966	A0A409VLL7	A0A409WMT6	Uncharacterized protein.	Uncharacterized protein.	0.998