(26 nodes) Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay network (Psilocybe cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_012210	Uncharacterized protein. (1446 aa)
	CVT25_012072	Uncharacterized protein. (773 aa)
	CVT25_014502	AAA_12 domain-containing protein. (1464 aa)
	CVT25_010849	Mago-bind domain-containing protein. (181 aa)
	CVT25_011231	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1374 aa)
	CVT25_015323	Uncharacterized protein. (282 aa)
	CVT25_003014	Uncharacterized protein. (1127 aa)
	CVT25_003012	RRM_2 domain-containing protein. (924 aa)
	CVT25_003684	Uncharacterized protein. (447 aa)
	CVT25_001954	Nudix hydrolase domain-containing protein. (737 aa)
	CVT25_014533	Uncharacterized protein. (889 aa)
	CVT25_007017	AAA_12 domain-containing protein. (807 aa)
	CVT25_006120	RNase_PH domain-containing protein. (266 aa)
	CVT25_003103	Uncharacterized protein. (444 aa)
	CVT25_012656	Uncharacterized protein. (690 aa)
	CVT25_009792	Uncharacterized protein. (1108 aa)
	CVT25_010192	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (802 aa)
	CVT25_006475	PINc domain-containing protein. (1249 aa)
	CVT25_012618	Uncharacterized protein. (194 aa)
	CVT25_008256	Uncharacterized protein. (1259 aa)
	CVT25_013941	RNase_PH domain-containing protein. (262 aa)
	CVT25_000275	Uncharacterized protein; Belongs to the DEAD box helicase family. (675 aa)
	CVT25_008966	Smg4_UPF3 domain-containing protein. (516 aa)
	CVT25_003860	WD_REPEATS_REGION domain-containing protein. (298 aa)
	CVT25_008134	Uncharacterized protein. (776 aa)
	CVT25_007463	Uncharacterized protein. (310 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_000275	CVT25_001954	A0A409XM48	A0A409WQR6	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nudix hydrolase domain-containing protein.	0.622
CVT25_000275	CVT25_003014	A0A409XM48	A0A409WN70	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.671
CVT25_000275	CVT25_003103	A0A409XM48	A0A409X4N3	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.681
CVT25_000275	CVT25_003684	A0A409XM48	A0A409WP58	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.622
CVT25_000275	CVT25_003860	A0A409XM48	A0A409XPW1	Uncharacterized protein; Belongs to the DEAD box helicase family.	WD_REPEATS_REGION domain-containing protein.	0.492
CVT25_000275	CVT25_006120	A0A409XM48	A0A409WZ02	Uncharacterized protein; Belongs to the DEAD box helicase family.	RNase_PH domain-containing protein.	0.640
CVT25_000275	CVT25_006475	A0A409XM48	A0A409XE88	Uncharacterized protein; Belongs to the DEAD box helicase family.	PINc domain-containing protein.	0.497
CVT25_000275	CVT25_007017	A0A409XM48	A0A409WY60	Uncharacterized protein; Belongs to the DEAD box helicase family.	AAA_12 domain-containing protein.	0.610
CVT25_000275	CVT25_007463	A0A409XM48	A0A409XVP3	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.624
CVT25_000275	CVT25_008134	A0A409XM48	A0A409XSS2	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.835
CVT25_000275	CVT25_008256	A0A409XM48	A0A409XJK6	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.624
CVT25_000275	CVT25_008966	A0A409XM48	A0A409XN35	Uncharacterized protein; Belongs to the DEAD box helicase family.	Smg4_UPF3 domain-containing protein.	0.836
CVT25_000275	CVT25_009792	A0A409XM48	A0A409X812	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.659
CVT25_000275	CVT25_010192	A0A409XM48	A0A409XCZ1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.780
CVT25_000275	CVT25_011231	A0A409XM48	A0A409WGR1	Uncharacterized protein; Belongs to the DEAD box helicase family.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.465
CVT25_000275	CVT25_012072	A0A409XM48	A0A409VMW6	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.610
CVT25_000275	CVT25_012618	A0A409XM48	A0A409XJ74	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.622
CVT25_000275	CVT25_012656	A0A409XM48	A0A409X7W1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.610
CVT25_000275	CVT25_013941	A0A409XM48	A0A409XJW9	Uncharacterized protein; Belongs to the DEAD box helicase family.	RNase_PH domain-containing protein.	0.627
CVT25_000275	CVT25_014502	A0A409XM48	A0A409VP36	Uncharacterized protein; Belongs to the DEAD box helicase family.	AAA_12 domain-containing protein.	0.610