(11 nodes) Nonfunctional rRNA decay network (Psilocybe cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_012840	HRDC domain-containing protein. (891 aa)
	CVT25_011667	Uncharacterized protein; Belongs to the RNR ribonuclease family. (1006 aa)
	CVT25_007463	Uncharacterized protein. (310 aa)
	CVT25_015275	Uncharacterized protein. (459 aa)
	CVT25_013974	MPN domain-containing protein. (664 aa)
	CVT25_013941	RNase_PH domain-containing protein. (262 aa)
	CVT25_009925	AAA domain-containing protein; Belongs to the AAA ATPase family. (390 aa)
	CVT25_006120	RNase_PH domain-containing protein. (266 aa)
	CVT25_015323	Uncharacterized protein. (282 aa)
	CVT25_011091	Photolyase/cryptochrome alpha/beta domain-containing protein. (1009 aa)
	CVT25_012697	Uncharacterized protein. (311 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_006120	CVT25_007463	A0A409WZ02	A0A409XVP3	RNase_PH domain-containing protein.	Uncharacterized protein.	0.998
CVT25_006120	CVT25_011667	A0A409WZ02	A0A409XWI1	RNase_PH domain-containing protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.981
CVT25_006120	CVT25_012840	A0A409WZ02	A0A409VRC1	RNase_PH domain-containing protein.	HRDC domain-containing protein.	0.600
CVT25_006120	CVT25_013941	A0A409WZ02	A0A409XJW9	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
CVT25_006120	CVT25_015323	A0A409WZ02	A0A409WH55	RNase_PH domain-containing protein.	Uncharacterized protein.	0.998
CVT25_007463	CVT25_006120	A0A409XVP3	A0A409WZ02	Uncharacterized protein.	RNase_PH domain-containing protein.	0.998
CVT25_007463	CVT25_011667	A0A409XVP3	A0A409XWI1	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.998
CVT25_007463	CVT25_012840	A0A409XVP3	A0A409VRC1	Uncharacterized protein.	HRDC domain-containing protein.	0.974
CVT25_007463	CVT25_013941	A0A409XVP3	A0A409XJW9	Uncharacterized protein.	RNase_PH domain-containing protein.	0.998
CVT25_007463	CVT25_015323	A0A409XVP3	A0A409WH55	Uncharacterized protein.	Uncharacterized protein.	0.999
CVT25_009925	CVT25_012697	A0A409XCQ9	A0A409VN54	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.430
CVT25_009925	CVT25_012840	A0A409XCQ9	A0A409VRC1	AAA domain-containing protein; Belongs to the AAA ATPase family.	HRDC domain-containing protein.	0.818
CVT25_009925	CVT25_013974	A0A409XCQ9	A0A409XPL4	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.672
CVT25_009925	CVT25_015275	A0A409XCQ9	A0A409XRD8	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.766
CVT25_011667	CVT25_006120	A0A409XWI1	A0A409WZ02	Uncharacterized protein; Belongs to the RNR ribonuclease family.	RNase_PH domain-containing protein.	0.981
CVT25_011667	CVT25_007463	A0A409XWI1	A0A409XVP3	Uncharacterized protein; Belongs to the RNR ribonuclease family.	Uncharacterized protein.	0.998
CVT25_011667	CVT25_012840	A0A409XWI1	A0A409VRC1	Uncharacterized protein; Belongs to the RNR ribonuclease family.	HRDC domain-containing protein.	0.974
CVT25_011667	CVT25_013941	A0A409XWI1	A0A409XJW9	Uncharacterized protein; Belongs to the RNR ribonuclease family.	RNase_PH domain-containing protein.	0.998
CVT25_011667	CVT25_015323	A0A409XWI1	A0A409WH55	Uncharacterized protein; Belongs to the RNR ribonuclease family.	Uncharacterized protein.	0.998
CVT25_012697	CVT25_009925	A0A409VN54	A0A409XCQ9	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.430