(7 nodes) PAZ domain network (Psilocybe cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_009886	Uncharacterized protein. (938 aa)
	CVT25_008331	Uncharacterized protein. (865 aa)
	CVT25_008698	Uncharacterized protein. (1688 aa)
	CVT25_007460	Uncharacterized protein. (892 aa)
	CVT25_015395	Uncharacterized protein; Belongs to the argonaute family. (957 aa)
	CVT25_015505	Uncharacterized protein. (942 aa)
	CVT25_008357	Uncharacterized protein. (793 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_007460	CVT25_008698	A0A409XVH1	A0A409XNM5	Uncharacterized protein.	Uncharacterized protein.	0.884
CVT25_008331	CVT25_008698	A0A409WV18	A0A409XNM5	Uncharacterized protein.	Uncharacterized protein.	0.879
CVT25_008357	CVT25_008698	A0A409WVA8	A0A409XNM5	Uncharacterized protein.	Uncharacterized protein.	0.879
CVT25_008698	CVT25_007460	A0A409XNM5	A0A409XVH1	Uncharacterized protein.	Uncharacterized protein.	0.884
CVT25_008698	CVT25_008331	A0A409XNM5	A0A409WV18	Uncharacterized protein.	Uncharacterized protein.	0.879
CVT25_008698	CVT25_008357	A0A409XNM5	A0A409WVA8	Uncharacterized protein.	Uncharacterized protein.	0.879
CVT25_008698	CVT25_009886	A0A409XNM5	A0A409XTH7	Uncharacterized protein.	Uncharacterized protein.	0.884
CVT25_008698	CVT25_015395	A0A409XNM5	A0A409WHL3	Uncharacterized protein.	Uncharacterized protein; Belongs to the argonaute family.	0.898
CVT25_008698	CVT25_015505	A0A409XNM5	A0A409WI38	Uncharacterized protein.	Uncharacterized protein.	0.898
CVT25_009886	CVT25_008698	A0A409XTH7	A0A409XNM5	Uncharacterized protein.	Uncharacterized protein.	0.884
CVT25_015395	CVT25_008698	A0A409WHL3	A0A409XNM5	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein.	0.898
CVT25_015505	CVT25_008698	A0A409WI38	A0A409XNM5	Uncharacterized protein.	Uncharacterized protein.	0.898