(16 nodes) TCP-1-like chaperonin intermediate domain superfamily network (Psilocybe cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_006142	Uncharacterized protein. (511 aa)
	CVT25_009210	Uncharacterized protein. (1326 aa)
	CVT25_014620	Uncharacterized protein. (452 aa)
	CVT25_003026	Uncharacterized protein. (569 aa)
	CVT25_002945	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (560 aa)
	CVT25_011553	Uncharacterized protein. (253 aa)
	CVT25_013378	Uncharacterized protein. (558 aa)
	CVT25_004532	Uncharacterized protein. (567 aa)
	CVT25_009026	Uncharacterized protein. (545 aa)
	CVT25_000102	Uncharacterized protein. (237 aa)
	CVT25_015261	T-complex protein 1 subunit delta. (539 aa)
	CVT25_009770	T-complex protein 1 subunit gamma. (580 aa)
	CVT25_008669	Uncharacterized protein. (209 aa)
	CVT25_008044	Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (608 aa)
	CVT25_001020	Uncharacterized protein. (420 aa)
	CVT25_008088	Uncharacterized protein. (391 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_000102	CVT25_002945	A0A409XQC6	A0A409WN11	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.937
CVT25_000102	CVT25_003026	A0A409XQC6	A0A409WN76	Uncharacterized protein.	Uncharacterized protein.	0.917
CVT25_000102	CVT25_004532	A0A409XQC6	A0A409VSA4	Uncharacterized protein.	Uncharacterized protein.	0.938
CVT25_000102	CVT25_009026	A0A409XQC6	A0A409VRN9	Uncharacterized protein.	Uncharacterized protein.	0.937
CVT25_000102	CVT25_009210	A0A409XQC6	A0A409WWE5	Uncharacterized protein.	Uncharacterized protein.	0.936
CVT25_000102	CVT25_013378	A0A409XQC6	A0A409VTB5	Uncharacterized protein.	Uncharacterized protein.	0.932
CVT25_000102	CVT25_015261	A0A409XQC6	A0A409XR19	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.925
CVT25_001020	CVT25_002945	A0A409X8K4	A0A409WN11	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.937
CVT25_001020	CVT25_003026	A0A409X8K4	A0A409WN76	Uncharacterized protein.	Uncharacterized protein.	0.917
CVT25_001020	CVT25_004532	A0A409X8K4	A0A409VSA4	Uncharacterized protein.	Uncharacterized protein.	0.938
CVT25_001020	CVT25_009026	A0A409X8K4	A0A409VRN9	Uncharacterized protein.	Uncharacterized protein.	0.937
CVT25_001020	CVT25_009210	A0A409X8K4	A0A409WWE5	Uncharacterized protein.	Uncharacterized protein.	0.936
CVT25_001020	CVT25_013378	A0A409X8K4	A0A409VTB5	Uncharacterized protein.	Uncharacterized protein.	0.932
CVT25_001020	CVT25_015261	A0A409X8K4	A0A409XR19	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.925
CVT25_002945	CVT25_000102	A0A409WN11	A0A409XQC6	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.937
CVT25_002945	CVT25_001020	A0A409WN11	A0A409X8K4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.937
CVT25_002945	CVT25_003026	A0A409WN11	A0A409WN76	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
CVT25_002945	CVT25_004532	A0A409WN11	A0A409VSA4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.999
CVT25_002945	CVT25_006142	A0A409WN11	A0A409WYV5	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.937
CVT25_002945	CVT25_008044	A0A409WN11	A0A409X9M6	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein; Belongs to the chaperonin (HSP60) family.	0.454