(13 nodes) p75 NTR receptor-mediated signalling network (Psilocybe cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_009856	Uncharacterized protein. (180 aa)
	CVT25_003085	Uncharacterized protein. (560 aa)
	CVT25_013735	Uncharacterized protein. (1300 aa)
	CVT25_014320	Uncharacterized protein. (582 aa)
	CVT25_014321	Uncharacterized protein. (596 aa)
	CVT25_003198	Uncharacterized protein. (363 aa)
	CVT25_015828	Uncharacterized protein. (1044 aa)
	CVT25_015830	Uncharacterized protein. (200 aa)
	CVT25_003257	Uncharacterized protein. (501 aa)
	CVT25_002782	Uncharacterized protein. (110 aa)
	CVT25_010298	Ubiquitin-like domain-containing protein. (159 aa)
	CVT25_005998	Uncharacterized protein. (363 aa)
	CVT25_004400	AB hydrolase-1 domain-containing protein. (381 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_002782	CVT25_003257	A0A409W5L0	A0A409WM79	Uncharacterized protein.	Uncharacterized protein.	0.624
CVT25_002782	CVT25_005998	A0A409W5L0	A0A409VMD4	Uncharacterized protein.	Uncharacterized protein.	0.620
CVT25_002782	CVT25_009856	A0A409W5L0	A0A409XTE8	Uncharacterized protein.	Uncharacterized protein.	0.620
CVT25_002782	CVT25_015828	A0A409W5L0	A0A409X539	Uncharacterized protein.	Uncharacterized protein.	0.681
CVT25_002782	CVT25_015830	A0A409W5L0	A0A409X511	Uncharacterized protein.	Uncharacterized protein.	0.681
CVT25_003085	CVT25_004400	A0A409XQL8	A0A409XVX9	Uncharacterized protein.	AB hydrolase-1 domain-containing protein.	0.445
CVT25_003085	CVT25_005998	A0A409XQL8	A0A409VMD4	Uncharacterized protein.	Uncharacterized protein.	0.716
CVT25_003085	CVT25_009856	A0A409XQL8	A0A409XTE8	Uncharacterized protein.	Uncharacterized protein.	0.716
CVT25_003085	CVT25_015828	A0A409XQL8	A0A409X539	Uncharacterized protein.	Uncharacterized protein.	0.951
CVT25_003085	CVT25_015830	A0A409XQL8	A0A409X511	Uncharacterized protein.	Uncharacterized protein.	0.951
CVT25_003198	CVT25_004400	A0A409X5M3	A0A409XVX9	Uncharacterized protein.	AB hydrolase-1 domain-containing protein.	0.445
CVT25_003198	CVT25_005998	A0A409X5M3	A0A409VMD4	Uncharacterized protein.	Uncharacterized protein.	0.716
CVT25_003198	CVT25_009856	A0A409X5M3	A0A409XTE8	Uncharacterized protein.	Uncharacterized protein.	0.716
CVT25_003198	CVT25_015828	A0A409X5M3	A0A409X539	Uncharacterized protein.	Uncharacterized protein.	0.951
CVT25_003198	CVT25_015830	A0A409X5M3	A0A409X511	Uncharacterized protein.	Uncharacterized protein.	0.951
CVT25_003257	CVT25_002782	A0A409WM79	A0A409W5L0	Uncharacterized protein.	Uncharacterized protein.	0.624
CVT25_003257	CVT25_010298	A0A409WM79	A0A409VNQ6	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.732
CVT25_003257	CVT25_014320	A0A409WM79	A0A409XKY9	Uncharacterized protein.	Uncharacterized protein.	0.624
CVT25_003257	CVT25_014321	A0A409WM79	A0A409XKY2	Uncharacterized protein.	Uncharacterized protein.	0.624
CVT25_004400	CVT25_003085	A0A409XVX9	A0A409XQL8	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.445