STRINGSTRING
CVT25_001954 CVT25_001954 CVT25_013520 CVT25_013520 CVT25_008134 CVT25_008134 LSM5 LSM5 CVT25_012618 CVT25_012618 LSM4 LSM4 CVT25_009468 CVT25_009468 LSM1 LSM1 CVT25_006798 CVT25_006798 CVT25_003463 CVT25_003463 CVT25_003459 CVT25_003459 CVT25_010413 CVT25_010413 CVT25_003684 CVT25_003684 CVT25_011793 CVT25_011793 CVT25_015368 CVT25_015368 LSM3 LSM3 CVT25_011042 CVT25_011042
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CVT25_001954Nudix hydrolase domain-containing protein. (737 aa)
CVT25_013520U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
CVT25_008134Uncharacterized protein. (776 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (63 aa)
CVT25_012618Uncharacterized protein. (194 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (248 aa)
CVT25_009468Uncharacterized protein. (1020 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (116 aa)
CVT25_006798Uncharacterized protein; Belongs to the DEAD box helicase family. (496 aa)
CVT25_003463Uncharacterized protein. (498 aa)
CVT25_003459Uncharacterized protein. (508 aa)
CVT25_010413Sm domain-containing protein. (104 aa)
CVT25_003684Uncharacterized protein. (447 aa)
CVT25_011793WD_REPEATS_REGION domain-containing protein. (1434 aa)
CVT25_015368Sm domain-containing protein. (123 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (105 aa)
CVT25_011042Uncharacterized protein. (502 aa)
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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