(32 nodes) Estrogen-dependent gene expression network (Psilocybe cyanescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_010907	Uncharacterized protein. (71 aa)
	CVT25_011193	Uncharacterized protein. (663 aa)
	CVT25_015632	Uncharacterized protein; Belongs to the cyclin family. (352 aa)
	CVT25_011716	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
	CVT25_011624	RPOL4c domain-containing protein. (137 aa)
	CVT25_002966	Uncharacterized protein. (170 aa)
	CVT25_007050	Uncharacterized protein. (208 aa)
	CVT25_003330	Histone H2B; Belongs to the histone H2B family. (146 aa)
	CVT25_010530	Uncharacterized protein. (74 aa)
	CVT25_006746	Histone H2B; Belongs to the histone H2B family. (146 aa)
	CVT25_008536	TFIIS-type domain-containing protein. (99 aa)
	CVT25_011572	Uncharacterized protein. (291 aa)
	CVT25_009912	Protein kinase domain-containing protein. (1115 aa)
	CVT25_001296	RNA_pol_L_2 domain-containing protein. (150 aa)
	CVT25_012326	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (157 aa)
	CVT25_014119	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (542 aa)
	CVT25_014114	Uncharacterized protein. (576 aa)
	CVT25_012796	Uncharacterized protein. (344 aa)
	CVT25_013187	Uncharacterized protein. (359 aa)
	CVT25_000275	Uncharacterized protein; Belongs to the DEAD box helicase family. (675 aa)
	CVT25_008693	Uncharacterized protein. (796 aa)
	CVT25_008736	Fork-head domain-containing protein. (326 aa)
	CVT25_005423	Fork-head domain-containing protein. (934 aa)
	CVT25_005731	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1239 aa)
	CVT25_005883	GATA-type domain-containing protein. (824 aa)
	CVT25_005896	RPOLD domain-containing protein. (379 aa)
	CVT25_005945	Uncharacterized protein. (857 aa)
	CVT25_012669	Uncharacterized protein. (298 aa)
	CVT25_008398	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1752 aa)
	CVT25_004597	Uncharacterized protein; Belongs to the cyclin family. (393 aa)
	CVT25_007829	Uncharacterized protein. (939 aa)
	CVT25_005724	Uncharacterized protein. (169 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_000275	CVT25_001296	A0A409XM48	A0A409XF03	Uncharacterized protein; Belongs to the DEAD box helicase family.	RNA_pol_L_2 domain-containing protein.	0.428
CVT25_000275	CVT25_002966	A0A409XM48	A0A409WMT6	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.418
CVT25_000275	CVT25_003330	A0A409XM48	A0A409X041	Uncharacterized protein; Belongs to the DEAD box helicase family.	Histone H2B; Belongs to the histone H2B family.	0.630
CVT25_000275	CVT25_005423	A0A409XM48	A0A409VQL8	Uncharacterized protein; Belongs to the DEAD box helicase family.	Fork-head domain-containing protein.	0.689
CVT25_000275	CVT25_005724	A0A409XM48	A0A409VLL7	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.706
CVT25_000275	CVT25_005731	A0A409XM48	A0A409VLJ4	Uncharacterized protein; Belongs to the DEAD box helicase family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.622
CVT25_000275	CVT25_005883	A0A409XM48	A0A409VM09	Uncharacterized protein; Belongs to the DEAD box helicase family.	GATA-type domain-containing protein.	0.648
CVT25_000275	CVT25_005896	A0A409XM48	A0A409VM16	Uncharacterized protein; Belongs to the DEAD box helicase family.	RPOLD domain-containing protein.	0.675
CVT25_000275	CVT25_005945	A0A409XM48	A0A409VMC0	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.698
CVT25_000275	CVT25_006746	A0A409XM48	A0A409X7H1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Histone H2B; Belongs to the histone H2B family.	0.630
CVT25_000275	CVT25_007050	A0A409XM48	A0A409WY85	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.767
CVT25_000275	CVT25_007829	A0A409XM48	A0A409VQG5	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.648
CVT25_000275	CVT25_008398	A0A409XM48	A0A409VQC2	Uncharacterized protein; Belongs to the DEAD box helicase family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.629
CVT25_000275	CVT25_008536	A0A409XM48	A0A409X9Z5	Uncharacterized protein; Belongs to the DEAD box helicase family.	TFIIS-type domain-containing protein.	0.488
CVT25_000275	CVT25_008693	A0A409XM48	A0A409XNH4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.645
CVT25_000275	CVT25_008736	A0A409XM48	A0A409XNW8	Uncharacterized protein; Belongs to the DEAD box helicase family.	Fork-head domain-containing protein.	0.645
CVT25_000275	CVT25_010907	A0A409XM48	A0A409WFP7	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.689
CVT25_000275	CVT25_011193	A0A409XM48	A0A409WGU8	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.437
CVT25_000275	CVT25_011624	A0A409XM48	A0A409WIU8	Uncharacterized protein; Belongs to the DEAD box helicase family.	RPOL4c domain-containing protein.	0.469
CVT25_000275	CVT25_011716	A0A409XM48	A0A409WIB8	Uncharacterized protein; Belongs to the DEAD box helicase family.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.670