84 items (Psilocybe cyanescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CVT25_009400	Uncharacterized protein. (372 aa)
	CVT25_005741	t-SNARE coiled-coil homology domain-containing protein. (394 aa)
	CVT25_005874	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (334 aa)
	CVT25_006047	F-box domain-containing protein. (542 aa)
	CVT25_012075	MYND-type domain-containing protein. (158 aa)
	CVT25_012093	Uncharacterized protein. (297 aa)
	CVT25_009076	F-box domain-containing protein. (472 aa)
	CVT25_009098	F-box domain-containing protein. (235 aa)
	CVT25_005455	F-box domain-containing protein. (599 aa)
	CVT25_000859	t-SNARE coiled-coil homology domain-containing protein. (234 aa)
	MED6	Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (290 aa)
	CVT25_010937	t-SNARE coiled-coil homology domain-containing protein. (228 aa)
	CVT25_011333	F-box domain-containing protein. (466 aa)
	CVT25_015299	F-box domain-containing protein. (723 aa)
	CVT25_015320	Uncharacterized protein. (520 aa)
	CVT25_011707	Uncharacterized protein. (605 aa)
	CVT25_011650	F-box domain-containing protein. (550 aa)
	CVT25_011869	Uncharacterized protein. (450 aa)
	CVT25_011850	t-SNARE coiled-coil homology domain-containing protein. (112 aa)
	CVT25_002288	F-box domain-containing protein. (377 aa)
	CVT25_002325	Uncharacterized protein; Belongs to the synaptobrevin family. (226 aa)
	CVT25_002859	F-box domain-containing protein. (1167 aa)
	CVT25_002811	Uncharacterized protein. (596 aa)
	CVT25_002663	Uncharacterized protein. (365 aa)
	CVT25_002673	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (223 aa)
	CVT25_003044	F-box domain-containing protein. (480 aa)
	CVT25_003547	Uncharacterized protein. (305 aa)
	CVT25_003633	Uncharacterized protein. (192 aa)
	CVT25_001753	Uncharacterized protein. (637 aa)
	CVT25_015464	F-box domain-containing protein. (901 aa)
	CVT25_015466	Uncharacterized protein. (138 aa)
	CVT25_013419	F-box domain-containing protein. (517 aa)
	CVT25_009406	Uncharacterized protein. (492 aa)
	CVT25_006136	F-box domain-containing protein. (562 aa)
	CVT25_000691	Uncharacterized protein. (341 aa)
	CVT25_000692	F-box domain-containing protein. (640 aa)
	CVT25_003345	F-box domain-containing protein. (584 aa)
	CVT25_013026	Uncharacterized protein. (783 aa)
	CVT25_012499	Uncharacterized protein; Belongs to the synaptobrevin family. (224 aa)
	CVT25_015785	Uncharacterized protein. (930 aa)
	CVT25_014211	Uncharacterized protein; Belongs to the synaptobrevin family. (234 aa)
	CVT25_013798	F-box domain-containing protein. (537 aa)
	CVT25_004162	F-box domain-containing protein. (709 aa)
	CVT25_012602	t-SNARE coiled-coil homology domain-containing protein. (351 aa)
	CVT25_000015	F-box domain-containing protein. (536 aa)
	CVT25_000041	t-SNARE coiled-coil homology domain-containing protein. (250 aa)
	CVT25_004087	F-box domain-containing protein. (610 aa)
	CVT25_008205	F-box domain-containing protein. (470 aa)
	CVT25_011487	t-SNARE coiled-coil homology domain-containing protein. (246 aa)
	CVT25_005150	V-SNARE coiled-coil homology domain-containing protein. (192 aa)
	CVT25_010217	t-SNARE coiled-coil homology domain-containing protein. (364 aa)
	CVT25_010210	Uncharacterized protein. (357 aa)
	CVT25_008503	Uncharacterized protein. (555 aa)
	CVT25_009150	F-box domain-containing protein. (601 aa)
	CVT25_011992	Uncharacterized protein. (2028 aa)
	CVT25_012202	Uncharacterized protein. (405 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (615 aa)
	CVT25_004817	F-box domain-containing protein. (723 aa)
	CVT25_007764	Uncharacterized protein. (592 aa)
	CVT25_014980	t-SNARE coiled-coil homology domain-containing protein. (141 aa)
	CVT25_005018	F-box domain-containing protein. (546 aa)
	CVT25_007389	F-box domain-containing protein. (597 aa)
	CVT25_003061	F-box domain-containing protein. (545 aa)
	CVT25_006232	F-box domain-containing protein. (549 aa)
	CVT25_008795	Uncharacterized protein. (498 aa)
	CVT25_013196	F-box domain-containing protein. (549 aa)
	CVT25_000753	Uncharacterized protein. (1171 aa)
	CVT25_001287	F-box domain-containing protein. (518 aa)
	CVT25_008688	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	CVT25_008687	t-SNARE coiled-coil homology domain-containing protein. (390 aa)
	CVT25_010382	F-box domain-containing protein. (681 aa)
	CVT25_000166	F-box domain-containing protein. (703 aa)
	CVT25_000188	F-box domain-containing protein. (751 aa)
	CVT25_000182	F-box domain-containing protein. (705 aa)
	CVT25_004508	F-box domain-containing protein. (563 aa)
	CVT25_004507	F-box domain-containing protein. (535 aa)
	CVT25_004509	Uncharacterized protein. (518 aa)
	CVT25_004514	Uncharacterized protein. (552 aa)
	CVT25_004504	F-box domain-containing protein. (532 aa)
	CVT25_004505	F-box domain-containing protein. (572 aa)
	CVT25_004506	F-box domain-containing protein. (471 aa)
	CVT25_012526	Uncharacterized protein. (103 aa)
	CVT25_013493	F-box domain-containing protein. (649 aa)
	CVT25_004953	F-box domain-containing protein. (548 aa)

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_000015	CVT25_003547	A0A409X8B5	A0A409WNW9	F-box domain-containing protein.	Uncharacterized protein.	0.424
CVT25_000015	CVT25_008688	A0A409X8B5	A0A409XNL8	F-box domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.463
CVT25_000015	CVT25_012202	A0A409X8B5	A0A409XFK8	F-box domain-containing protein.	Uncharacterized protein.	0.630
CVT25_000041	CVT25_000859	A0A409X8L8	A0A409VTF1	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.984
CVT25_000041	CVT25_002325	A0A409X8L8	A0A409WKH4	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.969
CVT25_000041	CVT25_002673	A0A409X8L8	A0A409WLG9	t-SNARE coiled-coil homology domain-containing protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.889
CVT25_000041	CVT25_003547	A0A409X8L8	A0A409WNW9	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.597
CVT25_000041	CVT25_005150	A0A409X8L8	A0A409XBQ9	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.968
CVT25_000041	CVT25_005741	A0A409X8L8	A0A409VLK4	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.943
CVT25_000041	CVT25_005874	A0A409X8L8	A0A409VM05	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.971
CVT25_000041	CVT25_008687	A0A409X8L8	A0A409XNP1	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.907
CVT25_000041	CVT25_008688	A0A409X8L8	A0A409XNL8	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.948
CVT25_000041	CVT25_010210	A0A409X8L8	A0A409XD44	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.918
CVT25_000041	CVT25_010217	A0A409X8L8	A0A409XD32	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.934
CVT25_000041	CVT25_010937	A0A409X8L8	A0A409WFS2	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.984
CVT25_000041	CVT25_011487	A0A409X8L8	A0A409XA42	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.820
CVT25_000041	CVT25_011850	A0A409X8L8	A0A409WIY3	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.548
CVT25_000041	CVT25_012499	A0A409X8L8	A0A409X0X0	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.890
CVT25_000041	CVT25_012602	A0A409X8L8	A0A409X7X0	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.933
CVT25_000041	CVT25_014211	A0A409X8L8	A0A409X1P4	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.969