(14 nodes) Cytosolic large ribosomal subunit network (Serpula lacrymans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F8PFS6_SERL3	Uncharacterized protein. (213 aa)
	F8PGM9_SERL3	Uncharacterized protein. (198 aa)
	F8PGX8_SERL3	Uncharacterized protein. (129 aa)
	F8PII3_SERL3	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (170 aa)
	F8PPT3_SERL3	Ribosomal_L2_C domain-containing protein. (254 aa)
	F8PQ86_SERL3	Uncharacterized protein. (191 aa)
	F8PR49_SERL3	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (220 aa)
	F8PS84_SERL3	Uncharacterized protein. (115 aa)
	F8PSD9_SERL3	Uncharacterized protein. (157 aa)
	F8Q9E2_SERL3	Ribosomal protein L37; Binds to the 23S rRNA. (95 aa)
	F8Q9S6_SERL3	Uncharacterized protein. (106 aa)
	F8QB54_SERL3	Uncharacterized protein. (149 aa)
	F8QCB0_SERL3	Ribosomal_L7Ae domain-containing protein. (286 aa)
	F8QDS1_SERL3	Uncharacterized protein. (160 aa)

Your Current Organism:

Serpula lacrymans

NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F8PFS6_SERL3	F8PGM9_SERL3	F8PFS6	F8PGM9	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PFS6_SERL3	F8PGX8_SERL3	F8PFS6	F8PGX8	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PFS6_SERL3	F8PII3_SERL3	F8PFS6	F8PII3	Uncharacterized protein.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
F8PFS6_SERL3	F8PPT3_SERL3	F8PFS6	F8PPT3	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.999
F8PFS6_SERL3	F8PQ86_SERL3	F8PFS6	F8PQ86	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PFS6_SERL3	F8PR49_SERL3	F8PFS6	F8PR49	Uncharacterized protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.999
F8PFS6_SERL3	F8PS84_SERL3	F8PFS6	F8PS84	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PFS6_SERL3	F8PSD9_SERL3	F8PFS6	F8PSD9	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PFS6_SERL3	F8Q9E2_SERL3	F8PFS6	F8Q9E2	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
F8PFS6_SERL3	F8Q9S6_SERL3	F8PFS6	F8Q9S6	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PFS6_SERL3	F8QB54_SERL3	F8PFS6	F8QB54	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PFS6_SERL3	F8QCB0_SERL3	F8PFS6	F8QCB0	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.999
F8PFS6_SERL3	F8QDS1_SERL3	F8PFS6	F8QDS1	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PGM9_SERL3	F8PFS6_SERL3	F8PGM9	F8PFS6	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PGM9_SERL3	F8PGX8_SERL3	F8PGM9	F8PGX8	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PGM9_SERL3	F8PII3_SERL3	F8PGM9	F8PII3	Uncharacterized protein.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
F8PGM9_SERL3	F8PPT3_SERL3	F8PGM9	F8PPT3	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.999
F8PGM9_SERL3	F8PQ86_SERL3	F8PGM9	F8PQ86	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PGM9_SERL3	F8PR49_SERL3	F8PGM9	F8PR49	Uncharacterized protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.999
F8PGM9_SERL3	F8PS84_SERL3	F8PGM9	F8PS84	Uncharacterized protein.	Uncharacterized protein.	0.999