17 items (Serpula lacrymans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F8PHU7_SERL3	Uncharacterized protein. (270 aa)
	F8PIH6_SERL3	Uncharacterized protein. (124 aa)
	F8PJ39_SERL3	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (183 aa)
	F8PJ43_SERL3	Uncharacterized protein. (150 aa)
	F8PPX6_SERL3	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. (167 aa)
	F8PQQ3_SERL3	Uncharacterized protein. (184 aa)
	F8PRX4_SERL3	Uncharacterized protein. (181 aa)
	F8PUG4_SERL3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (347 aa)
	F8PUL5_SERL3	Uncharacterized protein. (112 aa)
	F8PZT2_SERL3	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (213 aa)
	F8Q2G6_SERL3	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (301 aa)
	F8Q7G1_SERL3	Uncharacterized protein. (146 aa)
	F8QDN3_SERL3	Ribosomal_L2_C domain-containing protein. (404 aa)
	F8QEN0_SERL3	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (316 aa)
	F8QF89_SERL3	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (257 aa)
	F8QGJ5_SERL3	Uncharacterized protein. (59 aa)
	F8QHU5_SERL3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (123 aa)

Your Current Organism:

Serpula lacrymans

NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F8PHU7_SERL3	F8PIH6_SERL3	F8PHU7	F8PIH6	Uncharacterized protein.	Uncharacterized protein.	0.995
F8PHU7_SERL3	F8PJ39_SERL3	F8PHU7	F8PJ39	Uncharacterized protein.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.995
F8PHU7_SERL3	F8PJ43_SERL3	F8PHU7	F8PJ43	Uncharacterized protein.	Uncharacterized protein.	0.990
F8PHU7_SERL3	F8PPX6_SERL3	F8PHU7	F8PPX6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.997
F8PHU7_SERL3	F8PQQ3_SERL3	F8PHU7	F8PQQ3	Uncharacterized protein.	Uncharacterized protein.	0.988
F8PHU7_SERL3	F8PRX4_SERL3	F8PHU7	F8PRX4	Uncharacterized protein.	Uncharacterized protein.	0.994
F8PHU7_SERL3	F8PUG4_SERL3	F8PHU7	F8PUG4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.996
F8PHU7_SERL3	F8PUL5_SERL3	F8PHU7	F8PUL5	Uncharacterized protein.	Uncharacterized protein.	0.993
F8PHU7_SERL3	F8PZT2_SERL3	F8PHU7	F8PZT2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.	0.995
F8PHU7_SERL3	F8Q2G6_SERL3	F8PHU7	F8Q2G6	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.996
F8PHU7_SERL3	F8Q7G1_SERL3	F8PHU7	F8Q7G1	Uncharacterized protein.	Uncharacterized protein.	0.995
F8PHU7_SERL3	F8QDN3_SERL3	F8PHU7	F8QDN3	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.996
F8PHU7_SERL3	F8QEN0_SERL3	F8PHU7	F8QEN0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.997
F8PHU7_SERL3	F8QF89_SERL3	F8PHU7	F8QF89	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.997
F8PHU7_SERL3	F8QGJ5_SERL3	F8PHU7	F8QGJ5	Uncharacterized protein.	Uncharacterized protein.	0.994
F8PHU7_SERL3	F8QHU5_SERL3	F8PHU7	F8QHU5	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.998
F8PIH6_SERL3	F8PHU7_SERL3	F8PIH6	F8PHU7	Uncharacterized protein.	Uncharacterized protein.	0.995
F8PIH6_SERL3	F8PJ39_SERL3	F8PIH6	F8PJ39	Uncharacterized protein.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.997
F8PIH6_SERL3	F8PJ43_SERL3	F8PIH6	F8PJ43	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PIH6_SERL3	F8PPX6_SERL3	F8PIH6	F8PPX6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.998