69 items (Serpula lacrymans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F8Q756_SERL3	Uncharacterized protein. (1004 aa)
	F8PF79_SERL3	Uncharacterized protein. (251 aa)
	F8PFW8_SERL3	Uncharacterized protein. (1318 aa)
	F8PHT9_SERL3	Uncharacterized protein. (581 aa)
	F8PIF9_SERL3	Uncharacterized protein. (260 aa)
	F8PIL6_SERL3	Uncharacterized protein. (120 aa)
	F8PJ83_SERL3	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (442 aa)
	F8PKE3_SERL3	Ubiquitin-like domain-containing protein. (287 aa)
	F8PKE8_SERL3	Nup96 domain-containing protein. (909 aa)
	F8PKV7_SERL3	Fungal_trans domain-containing protein. (674 aa)
	F8PLA9_SERL3	Peptidase C50 domain-containing protein. (1749 aa)
	F8PLU6_SERL3	Uncharacterized protein. (250 aa)
	F8PML2_SERL3	Uncharacterized protein. (730 aa)
	F8PMM1_SERL3	Uncharacterized protein. (2116 aa)
	F8PMQ2_SERL3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (289 aa)
	F8PNG9_SERL3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (997 aa)
	F8PNM0_SERL3	TOG domain-containing protein. (1321 aa)
	F8PNT7_SERL3	PI31_Prot_N domain-containing protein. (121 aa)
	F8PP33_SERL3	Uncharacterized protein. (216 aa)
	F8PP81_SERL3	Uncharacterized protein. (219 aa)
	F8PPK5_SERL3	Uncharacterized protein. (555 aa)
	F8PPP3_SERL3	Uncharacterized protein. (561 aa)
	F8PQ73_SERL3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
	F8PQ74_SERL3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	F8PQD9_SERL3	Uncharacterized protein. (1373 aa)
	F8PR89_SERL3	Peptidase S59 domain-containing protein. (419 aa)
	F8PRA2_SERL3	Uncharacterized protein. (397 aa)
	F8PRH0_SERL3	WD_REPEATS_REGION domain-containing protein. (415 aa)
	F8PSY3_SERL3	Uncharacterized protein. (371 aa)
	F8PT74_SERL3	Uncharacterized protein. (312 aa)
	F8PWZ1_SERL3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (452 aa)
	F8PXJ3_SERL3	Metallophos domain-containing protein. (443 aa)
	F8Q024_SERL3	Uncharacterized protein. (337 aa)
	F8Q095_SERL3	Uncharacterized protein. (248 aa)
	F8Q2F6_SERL3	Uncharacterized protein. (624 aa)
	F8Q2N7_SERL3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
	F8Q2Z9_SERL3	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (785 aa)
	F8Q349_SERL3	Ubiquitin-like domain-containing protein. (112 aa)
	F8Q389_SERL3	Ubiquitin-like domain-containing protein. (88 aa)
	F8Q3B1_SERL3	Uncharacterized protein. (186 aa)
	F8Q3X3_SERL3	Dsl1_C domain-containing protein. (907 aa)
	F8Q3X5_SERL3	Ubiquitin-like domain-containing protein. (159 aa)
	F8Q4A3_SERL3	Uncharacterized protein. (550 aa)
	F8Q5T1_SERL3	Uncharacterized protein. (1212 aa)
	F8Q5V8_SERL3	DUF5595 domain-containing protein. (648 aa)
	F8Q675_SERL3	Uncharacterized protein. (85 aa)
	F8Q746_SERL3	Uncharacterized protein. (88 aa)
	F8Q7I3_SERL3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	F8Q825_SERL3	Metallophos domain-containing protein. (430 aa)
	F8Q828_SERL3	CENP-C_C domain-containing protein. (578 aa)
	F8Q8T4_SERL3	Nup188_C domain-containing protein. (2110 aa)
	F8Q9G3_SERL3	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (730 aa)
	F8QA85_SERL3	Uncharacterized protein. (451 aa)
	F8QBF7_SERL3	Uncharacterized protein. (693 aa)
	F8QBT3_SERL3	Uncharacterized protein. (242 aa)
	F8QBU5_SERL3	Nuclear pore protein. (873 aa)
	F8QD21_SERL3	Uncharacterized protein. (225 aa)
	F8QEK6_SERL3	Uncharacterized protein. (462 aa)
	F8QER5_SERL3	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
	F8QFL5_SERL3	AAA domain-containing protein. (134 aa)
	F8QFM6_SERL3	Uncharacterized protein. (149 aa)
	F8QFN9_SERL3	ELYS domain-containing protein. (208 aa)
	F8QG88_SERL3	Uncharacterized protein; Belongs to the AAA ATPase family. (441 aa)
	F8QGY9_SERL3	Uncharacterized protein. (2150 aa)
	F8QGZ0_SERL3	ANAPC5 domain-containing protein. (672 aa)
	F8QGZ3_SERL3	Uncharacterized protein. (789 aa)
	F8QI19_SERL3	Uncharacterized protein. (278 aa)
	F8QI56_SERL3	DHR10 domain-containing protein. (445 aa)
	F8QIT7_SERL3	Importin N-terminal domain-containing protein. (864 aa)

Your Current Organism:

Serpula lacrymans

NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F8PF79_SERL3	F8PIF9_SERL3	F8PF79	F8PIF9	Uncharacterized protein.	Uncharacterized protein.	0.918
F8PF79_SERL3	F8PKV7_SERL3	F8PF79	F8PKV7	Uncharacterized protein.	Fungal_trans domain-containing protein.	0.842
F8PF79_SERL3	F8PP33_SERL3	F8PF79	F8PP33	Uncharacterized protein.	Uncharacterized protein.	0.936
F8PF79_SERL3	F8PP81_SERL3	F8PF79	F8PP81	Uncharacterized protein.	Uncharacterized protein.	0.966
F8PF79_SERL3	F8PWZ1_SERL3	F8PF79	F8PWZ1	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.641
F8PF79_SERL3	F8Q2N7_SERL3	F8PF79	F8Q2N7	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.648
F8PF79_SERL3	F8Q3B1_SERL3	F8PF79	F8Q3B1	Uncharacterized protein.	Uncharacterized protein.	0.705
F8PF79_SERL3	F8Q675_SERL3	F8PF79	F8Q675	Uncharacterized protein.	Uncharacterized protein.	0.957
F8PF79_SERL3	F8QEK6_SERL3	F8PF79	F8QEK6	Uncharacterized protein.	Uncharacterized protein.	0.872
F8PF79_SERL3	F8QFL5_SERL3	F8PF79	F8QFL5	Uncharacterized protein.	AAA domain-containing protein.	0.911
F8PF79_SERL3	F8QG88_SERL3	F8PF79	F8QG88	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.987
F8PFW8_SERL3	F8PIL6_SERL3	F8PFW8	F8PIL6	Uncharacterized protein.	Uncharacterized protein.	0.674
F8PFW8_SERL3	F8PJ83_SERL3	F8PFW8	F8PJ83	Uncharacterized protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.996
F8PFW8_SERL3	F8PKE8_SERL3	F8PFW8	F8PKE8	Uncharacterized protein.	Nup96 domain-containing protein.	0.978
F8PFW8_SERL3	F8PMM1_SERL3	F8PFW8	F8PMM1	Uncharacterized protein.	Uncharacterized protein.	0.999
F8PFW8_SERL3	F8PMQ2_SERL3	F8PFW8	F8PMQ2	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.677
F8PFW8_SERL3	F8PPK5_SERL3	F8PFW8	F8PPK5	Uncharacterized protein.	Uncharacterized protein.	0.449
F8PFW8_SERL3	F8PQD9_SERL3	F8PFW8	F8PQD9	Uncharacterized protein.	Uncharacterized protein.	0.989
F8PFW8_SERL3	F8PR89_SERL3	F8PFW8	F8PR89	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.978
F8PFW8_SERL3	F8PRA2_SERL3	F8PFW8	F8PRA2	Uncharacterized protein.	Uncharacterized protein.	0.950