STRINGSTRING
RAD18 RAD18 PIEZO1 PIEZO1 ENSEEUP00000000369 ENSEEUP00000000369 FBH1 FBH1 RAD50 RAD50 ENSEEUP00000000645 ENSEEUP00000000645 PIEZO2 PIEZO2 LOC103128582 LOC103128582 ENSEEUP00000000900 ENSEEUP00000000900 POLQ POLQ POLH POLH ORC4 ORC4 WDHD1 WDHD1 BLM BLM RAD51B RAD51B ENSEEUP00000001330 ENSEEUP00000001330 RAD51D RAD51D ENSEEUP00000001566 ENSEEUP00000001566 RAD51C RAD51C RBBP8 RBBP8 USP38 USP38 RPA1 RPA1 TDRD3 TDRD3 ENSEEUP00000002022 ENSEEUP00000002022 RAD51AP1 RAD51AP1 PRIM2 PRIM2 TIMELESS TIMELESS STN1 STN1 ENSEEUP00000002093 ENSEEUP00000002093 ENSEEUP00000002125 ENSEEUP00000002125 ENSEEUP00000002216 ENSEEUP00000002216 RHNO1-2 RHNO1-2 BRCA1 BRCA1 ENSEEUP00000002522 ENSEEUP00000002522 MCM6 MCM6 ENSEEUP00000002672 ENSEEUP00000002672 HELB HELB PCNA PCNA CHD1L CHD1L ENSEEUP00000002862 ENSEEUP00000002862 ORC3 ORC3 PIF1 PIF1 NUTF2 NUTF2 REV3L REV3L CHEK1 CHEK1 ERCC8 ERCC8 MCMDC2 MCMDC2 DCAKD DCAKD ENSEEUP00000004392 ENSEEUP00000004392 GEN1 GEN1 GINS4 GINS4 WRN WRN MCM3 MCM3 SMARCAL1 SMARCAL1 ENSEEUP00000004813 ENSEEUP00000004813 CLSPN CLSPN ENSEEUP00000004885 ENSEEUP00000004885 RTEL1 RTEL1 ENSEEUP00000004944 ENSEEUP00000004944 BARD1 BARD1 DBF4 DBF4 DCLRE1A DCLRE1A FANCM FANCM XPA XPA MAD2L2 MAD2L2 MSH6 MSH6 MCM10 MCM10 ENSEEUP00000005701 ENSEEUP00000005701 POLD2 POLD2 FAN1 FAN1 ENSEEUP00000005927 ENSEEUP00000005927 RAD52 RAD52 CDC45 CDC45 MCM8 MCM8 XRCC3 XRCC3 WDR48 WDR48 USP1 USP1 FAAP20 FAAP20 TOPBP1 TOPBP1 ENSEEUP00000006572 ENSEEUP00000006572 HES2 HES2 RHNO1 RHNO1 MCM7 MCM7 ERCC4 ERCC4 ATM ATM RAD54B RAD54B RAD54L RAD54L RAD1 RAD1 HES5 HES5 MCM4 MCM4 ENSEEUP00000007672 ENSEEUP00000007672 ENSEEUP00000007680 ENSEEUP00000007680 LOC107522399 LOC107522399 MRE11 MRE11 ERCC6 ERCC6 RFC4 RFC4 EXO1 EXO1 CDT1 CDT1 ENSEEUP00000007942 ENSEEUP00000007942 DNA2 DNA2 RADX RADX POLD3 POLD3 MAK MAK TWNK TWNK RFC3 RFC3 FANCL FANCL CDC7 CDC7 ERCC6L2 ERCC6L2 ENSEEUP00000008566 ENSEEUP00000008566 USP46 USP46 ORC2 ORC2 ENSEEUP00000008948 ENSEEUP00000008948 BRCA2 BRCA2 RECQL5 RECQL5 POLE4 POLE4 EME1 EME1 GINS2 GINS2 POLA1 POLA1 ENSEEUP00000009711 ENSEEUP00000009711 MCPH1 MCPH1 HUS1 HUS1 NEIL3 NEIL3 FANCI FANCI RMI1 RMI1 ENSEEUP00000010090 ENSEEUP00000010090 POLG POLG ZRANB3 ZRANB3 UBE2A UBE2A WDR20 WDR20 BRIP1 BRIP1 ENSEEUP00000010627 ENSEEUP00000010627 ORC5 ORC5 WRNIP1 WRNIP1 ATR ATR ORC6 ORC6 ENSEEUP00000011081 ENSEEUP00000011081 FANCE FANCE NARS1 NARS1 TOP3A TOP3A ENSEEUP00000011189 ENSEEUP00000011189 ORC1 ORC1 WDR76 WDR76 ENSEEUP00000011399 ENSEEUP00000011399 ENSEEUP00000011467 ENSEEUP00000011467 POLE3 POLE3 ATAD5 ATAD5 ENSEEUP00000011645 ENSEEUP00000011645 ERCC1 ERCC1 PMS1 PMS1 RFC5 RFC5 REV1 REV1 PRIMPOL PRIMPOL MLH3 MLH3 FANCD2 FANCD2 PMS2 PMS2 ENSEEUP00000012980 ENSEEUP00000012980 DMC1 DMC1 DSCC1 DSCC1 POLE2 POLE2 MEIOB MEIOB UBE2V2 UBE2V2 MCM2 MCM2 POLI POLI XPC XPC ENSEEUP00000013883 ENSEEUP00000013883 PALB2 PALB2 HLTF HLTF SLF1 SLF1 MUS81 MUS81 CDC6 CDC6 MSH2 MSH2 NBN NBN FANCC FANCC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAD18E3 ubiquitin-protein ligase RAD18. (440 aa)
PIEZO1Piezo-type mechanosensitive ion channel component. (1905 aa)
ENSEEUP00000000369annotation not available (121 aa)
FBH1F-box DNA helicase 1 isoform X1. (977 aa)
RAD50DNA repair protein RAD50 isoform X1. (1311 aa)
ENSEEUP00000000645annotation not available (588 aa)
PIEZO2Piezo-type mechanosensitive ion channel component. (405 aa)
LOC103128582Fanconi anemia core complex-associated protein 24-like. (216 aa)
ENSEEUP00000000900annotation not available (548 aa)
POLQDNA polymerase theta. (2561 aa)
POLHDNA polymerase eta. (704 aa)
ORC4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (436 aa)
WDHD1WD repeat and HMG-box DNA binding protein 1. (1130 aa)
BLMBloom syndrome protein. (1383 aa)
RAD51BDNA repair protein RAD51 homolog 2. (344 aa)
ENSEEUP00000001330annotation not available (782 aa)
RAD51DDNA repair protein RAD51 homolog 4 isoform X1. (327 aa)
ENSEEUP00000001566annotation not available (497 aa)
RAD51CDNA repair protein RAD51 homolog 3. (377 aa)
RBBP8DNA endonuclease RBBP8. (903 aa)
USP38Ubiquitin carboxyl-terminal hydrolase 38 isoform X1; Belongs to the peptidase C19 family. (1024 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
TDRD3Tudor domain-containing protein 3. (650 aa)
ENSEEUP00000002022annotation not available (356 aa)
RAD51AP1RAD51-associated protein 1 isoform X1. (201 aa)
PRIM2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (452 aa)
TIMELESSTimeless circadian regulator. (1214 aa)
STN1STN1 subunit of CST complex. (369 aa)
ENSEEUP00000002093annotation not available (1887 aa)
ENSEEUP00000002125annotation not available (198 aa)
ENSEEUP00000002216annotation not available (543 aa)
RHNO1-2RAD9, HUS1, RAD1-interacting nuclear orphan protein 1. (133 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1812 aa)
ENSEEUP00000002522annotation not available (706 aa)
MCM6DNA helicase; Belongs to the MCM family. (820 aa)
ENSEEUP00000002672annotation not available (209 aa)
HELBDNA helicase B. (1070 aa)
PCNAProliferating cell nuclear antigen. (259 aa)
CHD1Lchromodomain-helicase-DNA-binding protein 1-like isoform X1. (873 aa)
ENSEEUP00000002862annotation not available (684 aa)
ORC3Origin recognition complex subunit 3. (712 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (436 aa)
NUTF2Nuclear transport factor 2. (127 aa)
REV3LDNA polymerase zeta catalytic subunit. (3075 aa)
CHEK1Serine/threonine-protein kinase Chk1 isoform X1; Belongs to the protein kinase superfamily. (476 aa)
ERCC8DNA excision repair protein ERCC-8. (395 aa)
MCMDC2MCM domain-containing protein 2 isoform X2. (590 aa)
DCAKDdephospho-CoA kinase domain-containing protein. (231 aa)
ENSEEUP00000004392annotation not available (410 aa)
GEN1Flap endonuclease GEN homolog 1. (871 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (224 aa)
WRNLOW QUALITY PROTEIN: Werner syndrome ATP-dependent helicase. (1264 aa)
MCM3DNA helicase; Belongs to the MCM family. (788 aa)
SMARCAL1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (843 aa)
ENSEEUP00000004813annotation not available (1112 aa)
CLSPNClaspin. (1328 aa)
ENSEEUP00000004885annotation not available (315 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1276 aa)
ENSEEUP00000004944annotation not available (389 aa)
BARD1BRCA1-associated RING domain protein 1. (611 aa)
DBF4Protein DBF4 homolog A. (514 aa)
DCLRE1ADNA cross-link repair 1A protein. (1003 aa)
FANCMFanconi anemia group M protein. (1962 aa)
XPADNA repair protein complementing XP-A cells. (214 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B. (216 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1139 aa)
MCM10Minichromosome maintenance 10 replication initiation factor. (835 aa)
ENSEEUP00000005701annotation not available (1146 aa)
POLD2DNA polymerase delta subunit 2. (466 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1007 aa)
ENSEEUP00000005927annotation not available (647 aa)
RAD52DNA repair protein RAD52 homolog isoform X1. (391 aa)
CDC45Cell division control protein 45 homolog. (481 aa)
MCM8DNA helicase MCM8 isoform X1; Belongs to the MCM family. (822 aa)
XRCC3DNA repair protein XRCC3 isoform X2. (254 aa)
WDR48WD repeat-containing protein 48 isoform X1. (651 aa)
USP1Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (726 aa)
FAAP20Fanconi anemia core complex-associated protein 20. (153 aa)
TOPBP1DNA topoisomerase 2-binding protein 1 isoform X1. (1452 aa)
ENSEEUP00000006572annotation not available (1974 aa)
HES2Transcription factor HES-2. (159 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (229 aa)
MCM7Minichromosome maintenance complex component 7. (682 aa)
ERCC4DNA repair endonuclease XPF. (918 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3041 aa)
RAD54BDNA repair and recombination protein RAD54B. (904 aa)
RAD54LDNA repair and recombination protein RAD54-like. (747 aa)
RAD1Cell cycle checkpoint protein RAD1. (281 aa)
HES5Transcription factor HES-5. (160 aa)
MCM4DNA helicase; Belongs to the MCM family. (829 aa)
ENSEEUP00000007672annotation not available (902 aa)
ENSEEUP00000007680annotation not available (700 aa)
LOC107522399WD repeat and FYVE domain-containing protein 1-like. (409 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (656 aa)
ERCC6DNA excision repair protein ERCC-6. (1468 aa)
RFC4Replication factor C subunit 4. (363 aa)
EXO1Exonuclease 1. (772 aa)
CDT1DNA replication factor Cdt1. (541 aa)
ENSEEUP00000007942annotation not available (1207 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (924 aa)
RADXUncharacterized protein CXorf57 homolog. (645 aa)
POLD3DNA polymerase delta subunit 3. (404 aa)
MAKSerine/threonine-protein kinase MAK isoform X2. (623 aa)
TWNKTwinkle protein, mitochondrial. (682 aa)
RFC3Replication factor C subunit 3. (353 aa)
FANCLE3 ubiquitin-protein ligase FANCL. (372 aa)
CDC7Cell division cycle 7-related protein kinase. (483 aa)
ERCC6L2LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like 2. (708 aa)
ENSEEUP00000008566annotation not available (709 aa)
USP46Ubiquitin carboxyl-terminal hydrolase 46 isoform X3; Belongs to the peptidase C19 family. (294 aa)
ORC2Origin recognition complex subunit 2. (548 aa)
ENSEEUP00000008948annotation not available (167 aa)
BRCA2Breast cancer type 2 susceptibility protein. (3345 aa)
RECQL5ATP-dependent DNA helicase Q5. (979 aa)
POLE4DNA polymerase epsilon subunit 4. (97 aa)
EME1Crossover junction endonuclease EME1 isoform X1. (563 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
POLA1DNA polymerase alpha 1, catalytic subunit. (1463 aa)
ENSEEUP00000009711annotation not available (333 aa)
MCPH1Microcephalin isoform X1. (776 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (279 aa)
NEIL3Endonuclease 8-like 3. (453 aa)
FANCIFanconi anemia group I protein isoform X2. (1228 aa)
RMI1recQ-mediated genome instability protein 1. (608 aa)
ENSEEUP00000010090annotation not available (245 aa)
POLGDNA polymerase subunit gamma-1. (1125 aa)
ZRANB3DNA annealing helicase and endonuclease ZRANB3 isoform X1. (1000 aa)
UBE2AUbiquitin-conjugating enzyme E2 B isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
WDR20WD repeat-containing protein 20 isoform X2. (554 aa)
BRIP1Fanconi anemia group J protein. (1239 aa)
ENSEEUP00000010627annotation not available (1121 aa)
ORC5Origin recognition complex subunit 5. (420 aa)
WRNIP1ATPase WRNIP1 isoform X1. (533 aa)
ATRSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2572 aa)
ORC6Origin recognition complex subunit 6. (252 aa)
ENSEEUP00000011081annotation not available (427 aa)
FANCEFanconi anemia group E protein. (503 aa)
NARS1asparagine--tRNA ligase, cytoplasmic isoform X1. (548 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (943 aa)
ENSEEUP00000011189annotation not available (1002 aa)
ORC1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (797 aa)
WDR76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (604 aa)
ENSEEUP00000011399annotation not available (197 aa)
ENSEEUP00000011467annotation not available (851 aa)
POLE3DNA polymerase epsilon subunit 3. (147 aa)
ATAD5ATPase family AAA domain containing 5. (1813 aa)
ENSEEUP00000011645annotation not available (1440 aa)
ERCC1DNA excision repair protein ERCC-1 isoform X2. (232 aa)
PMS1PMS1 protein homolog 1 isoform X6. (931 aa)
RFC5Replication factor C subunit 5. (304 aa)
REV1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1011 aa)
PRIMPOLDNA-directed primase/polymerase protein isoform X1. (549 aa)
MLH3DNA mismatch repair protein Mlh3 isoform X1. (1403 aa)
FANCD2Fanconi anemia group D2 protein. (1462 aa)
PMS2Mismatch repair endonuclease PMS2. (845 aa)
ENSEEUP00000012980annotation not available (357 aa)
DMC1Meiotic recombination protein DMC1/LIM15 homolog isoform X1; Belongs to the RecA family. (323 aa)
DSCC1DNA replication and sister chromatid cohesion 1. (279 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (516 aa)
MEIOBMeiosis-specific with OB domain-containing protein. (214 aa)
UBE2V2Ubiquitin conjugating enzyme E2 V2. (144 aa)
MCM2DNA helicase; Belongs to the MCM family. (536 aa)
POLIDNA polymerase iota. (383 aa)
XPCDNA repair protein complementing XP-C cells. (912 aa)
ENSEEUP00000013883annotation not available (218 aa)
PALB2Partner and localizer of BRCA2 isoform X2. (1173 aa)
HLTFHelicase-like transcription factor isoform X2. (1009 aa)
SLF1LOW QUALITY PROTEIN: SMC5-SMC6 complex localization factor protein 1. (1057 aa)
MUS81Crossover junction endonuclease MUS81 isoform X3. (464 aa)
CDC6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (553 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (932 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (753 aa)
FANCCFanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1. (509 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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