STRINGSTRING
ENSEEUP00000000369 ENSEEUP00000000369 FBH1 FBH1 RAD50 RAD50 WDHD1 WDHD1 BLM BLM RAD51B RAD51B ENSEEUP00000001330 ENSEEUP00000001330 RAD51D RAD51D RAD51C RAD51C RBBP8 RBBP8 RPA1 RPA1 TDRD3 TDRD3 RAD51AP1 RAD51AP1 ENSEEUP00000002216 ENSEEUP00000002216 RHNO1-2 RHNO1-2 BRCA1 BRCA1 PIF1 PIF1 CHEK1 CHEK1 ENSEEUP00000004392 ENSEEUP00000004392 GEN1 GEN1 WRN WRN ENSEEUP00000004813 ENSEEUP00000004813 CLSPN CLSPN RTEL1 RTEL1 BARD1 BARD1 FANCM FANCM RAD52 RAD52 XRCC3 XRCC3 TOPBP1 TOPBP1 ENSEEUP00000006572 ENSEEUP00000006572 RHNO1 RHNO1 ATM ATM RAD1 RAD1 MRE11 MRE11 EXO1 EXO1 DNA2 DNA2 ENSEEUP00000008566 ENSEEUP00000008566 BRCA2 BRCA2 RECQL5 RECQL5 ENSEEUP00000009711 ENSEEUP00000009711 MCPH1 MCPH1 HUS1 HUS1 RMI1 RMI1 BRIP1 BRIP1 ATR ATR TOP3A TOP3A ATAD5 ATAD5 DMC1 DMC1 MEIOB MEIOB PALB2 PALB2 SLF1 SLF1 NBN NBN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSEEUP00000000369annotation not available (121 aa)
FBH1F-box DNA helicase 1 isoform X1. (977 aa)
RAD50DNA repair protein RAD50 isoform X1. (1311 aa)
WDHD1WD repeat and HMG-box DNA binding protein 1. (1130 aa)
BLMBloom syndrome protein. (1383 aa)
RAD51BDNA repair protein RAD51 homolog 2. (344 aa)
ENSEEUP00000001330annotation not available (782 aa)
RAD51DDNA repair protein RAD51 homolog 4 isoform X1. (327 aa)
RAD51CDNA repair protein RAD51 homolog 3. (377 aa)
RBBP8DNA endonuclease RBBP8. (903 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
TDRD3Tudor domain-containing protein 3. (650 aa)
RAD51AP1RAD51-associated protein 1 isoform X1. (201 aa)
ENSEEUP00000002216annotation not available (543 aa)
RHNO1-2RAD9, HUS1, RAD1-interacting nuclear orphan protein 1. (133 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1812 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (436 aa)
CHEK1Serine/threonine-protein kinase Chk1 isoform X1; Belongs to the protein kinase superfamily. (476 aa)
ENSEEUP00000004392annotation not available (410 aa)
GEN1Flap endonuclease GEN homolog 1. (871 aa)
WRNLOW QUALITY PROTEIN: Werner syndrome ATP-dependent helicase. (1264 aa)
ENSEEUP00000004813annotation not available (1112 aa)
CLSPNClaspin. (1328 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1276 aa)
BARD1BRCA1-associated RING domain protein 1. (611 aa)
FANCMFanconi anemia group M protein. (1962 aa)
RAD52DNA repair protein RAD52 homolog isoform X1. (391 aa)
XRCC3DNA repair protein XRCC3 isoform X2. (254 aa)
TOPBP1DNA topoisomerase 2-binding protein 1 isoform X1. (1452 aa)
ENSEEUP00000006572annotation not available (1974 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (229 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3041 aa)
RAD1Cell cycle checkpoint protein RAD1. (281 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (656 aa)
EXO1Exonuclease 1. (772 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (924 aa)
ENSEEUP00000008566annotation not available (709 aa)
BRCA2Breast cancer type 2 susceptibility protein. (3345 aa)
RECQL5ATP-dependent DNA helicase Q5. (979 aa)
ENSEEUP00000009711annotation not available (333 aa)
MCPH1Microcephalin isoform X1. (776 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (279 aa)
RMI1recQ-mediated genome instability protein 1. (608 aa)
BRIP1Fanconi anemia group J protein. (1239 aa)
ATRSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2572 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (943 aa)
ATAD5ATPase family AAA domain containing 5. (1813 aa)
DMC1Meiotic recombination protein DMC1/LIM15 homolog isoform X1; Belongs to the RecA family. (323 aa)
MEIOBMeiosis-specific with OB domain-containing protein. (214 aa)
PALB2Partner and localizer of BRCA2 isoform X2. (1173 aa)
SLF1LOW QUALITY PROTEIN: SMC5-SMC6 complex localization factor protein 1. (1057 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (753 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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