6 items (Erinaceus europaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHD1L	chromodomain-helicase-DNA-binding protein 1-like isoform X1. (873 aa)
	ENSEEUP00000004944	annotation not available (389 aa)
	XPA	DNA repair protein complementing XP-A cells. (214 aa)
	ERCC4	DNA repair endonuclease XPF. (918 aa)
	ENSEEUP00000011189	annotation not available (1002 aa)
	ERCC1	DNA excision repair protein ERCC-1 isoform X2. (232 aa)

Your Current Organism:

Erinaceus europaeus

NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHD1L	ENSEEUP00000004944	ENSEEUP00000002825	ENSEEUP00000004944	chromodomain-helicase-DNA-binding protein 1-like isoform X1.	annotation not available	0.929
CHD1L	ENSEEUP00000011189	ENSEEUP00000002825	ENSEEUP00000011189	chromodomain-helicase-DNA-binding protein 1-like isoform X1.	annotation not available	0.929
CHD1L	ERCC1	ENSEEUP00000002825	ENSEEUP00000011651	chromodomain-helicase-DNA-binding protein 1-like isoform X1.	DNA excision repair protein ERCC-1 isoform X2.	0.595
CHD1L	ERCC4	ENSEEUP00000002825	ENSEEUP00000007144	chromodomain-helicase-DNA-binding protein 1-like isoform X1.	DNA repair endonuclease XPF.	0.741
CHD1L	XPA	ENSEEUP00000002825	ENSEEUP00000005331	chromodomain-helicase-DNA-binding protein 1-like isoform X1.	DNA repair protein complementing XP-A cells.	0.944
ENSEEUP00000004944	CHD1L	ENSEEUP00000004944	ENSEEUP00000002825	annotation not available	chromodomain-helicase-DNA-binding protein 1-like isoform X1.	0.929
ENSEEUP00000004944	ENSEEUP00000011189	ENSEEUP00000004944	ENSEEUP00000011189	annotation not available	annotation not available	0.899
ENSEEUP00000004944	ERCC1	ENSEEUP00000004944	ENSEEUP00000011651	annotation not available	DNA excision repair protein ERCC-1 isoform X2.	0.880
ENSEEUP00000004944	ERCC4	ENSEEUP00000004944	ENSEEUP00000007144	annotation not available	DNA repair endonuclease XPF.	0.910
ENSEEUP00000004944	XPA	ENSEEUP00000004944	ENSEEUP00000005331	annotation not available	DNA repair protein complementing XP-A cells.	0.949
ENSEEUP00000011189	CHD1L	ENSEEUP00000011189	ENSEEUP00000002825	annotation not available	chromodomain-helicase-DNA-binding protein 1-like isoform X1.	0.929
ENSEEUP00000011189	ENSEEUP00000004944	ENSEEUP00000011189	ENSEEUP00000004944	annotation not available	annotation not available	0.899
ENSEEUP00000011189	ERCC1	ENSEEUP00000011189	ENSEEUP00000011651	annotation not available	DNA excision repair protein ERCC-1 isoform X2.	0.880
ENSEEUP00000011189	ERCC4	ENSEEUP00000011189	ENSEEUP00000007144	annotation not available	DNA repair endonuclease XPF.	0.910
ENSEEUP00000011189	XPA	ENSEEUP00000011189	ENSEEUP00000005331	annotation not available	DNA repair protein complementing XP-A cells.	0.949
ERCC1	CHD1L	ENSEEUP00000011651	ENSEEUP00000002825	DNA excision repair protein ERCC-1 isoform X2.	chromodomain-helicase-DNA-binding protein 1-like isoform X1.	0.595
ERCC1	ENSEEUP00000004944	ENSEEUP00000011651	ENSEEUP00000004944	DNA excision repair protein ERCC-1 isoform X2.	annotation not available	0.880
ERCC1	ENSEEUP00000011189	ENSEEUP00000011651	ENSEEUP00000011189	DNA excision repair protein ERCC-1 isoform X2.	annotation not available	0.880
ERCC1	ERCC4	ENSEEUP00000011651	ENSEEUP00000007144	DNA excision repair protein ERCC-1 isoform X2.	DNA repair endonuclease XPF.	0.999
ERCC1	XPA	ENSEEUP00000011651	ENSEEUP00000005331	DNA excision repair protein ERCC-1 isoform X2.	DNA repair protein complementing XP-A cells.	0.995