STRINGSTRING
LOC103117326 LOC103117326 USH1G USH1G RDH11 RDH11 CROCC CROCC ENSEEUP00000013094 ENSEEUP00000013094 SNAP25 SNAP25 USH1C USH1C C8orf37 C8orf37 DRAM2 DRAM2 MYO3B MYO3B AIPL1 AIPL1 WHRN WHRN DNM1 DNM1 STX3 STX3 CCDC66 CCDC66 ATP1B2 ATP1B2 MAK MAK GUK1 GUK1 RCVRN RCVRN RHO RHO EPB41L5 EPB41L5 IMPG1 IMPG1 DHRS12 DHRS12 KIFAP3 KIFAP3 OPN1SW OPN1SW PDC PDC GUCA1B GUCA1B GNAT2 GNAT2 RDH12 RDH12 RS1 RS1 ENSEEUP00000003295 ENSEEUP00000003295 TULP1 TULP1 MYO7A MYO7A PRPH2 PRPH2 GNAT1 GNAT1 LOC103114259 LOC103114259
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103117326Usherin-like. (4811 aa)
USH1GUsher syndrome type-1G protein. (405 aa)
RDH11Retinol dehydrogenase 11 isoform X1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (312 aa)
CROCCRootletin. (1996 aa)
ENSEEUP00000013094annotation not available (560 aa)
SNAP25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (206 aa)
USH1CUSH1 protein network component harmonin. (786 aa)
C8orf37Protein C8orf37 homolog. (155 aa)
DRAM2DNA damage-regulated autophagy modulator protein 2. (231 aa)
MYO3Bmyosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1278 aa)
AIPL1Aryl-hydrocarbon-interacting protein-like 1 isoform X1. (381 aa)
WHRNWhirlin isoform X2. (901 aa)
DNM1Dynamin-1 isoform X4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (849 aa)
STX3Syntaxin-3 isoform X1; Belongs to the syntaxin family. (278 aa)
CCDC66LOW QUALITY PROTEIN: coiled-coil domain-containing protein 66. (826 aa)
ATP1B2Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (290 aa)
MAKSerine/threonine-protein kinase MAK isoform X2. (623 aa)
GUK1Guanylate kinase isoform X1. (170 aa)
RCVRNRecoverin. (202 aa)
RHORhodopsin. (282 aa)
EPB41L5Erythrocyte membrane protein band 4.1 like 5. (731 aa)
IMPG1Interphotoreceptor matrix proteoglycan 1. (781 aa)
DHRS12Dehydrogenase/reductase SDR family member 12. (185 aa)
KIFAP3Kinesin-associated protein 3 isoform X1. (800 aa)
OPN1SWShort-wave-sensitive opsin 1. (350 aa)
PDCPhosducin. (223 aa)
GUCA1BGuanylyl cyclase-activating protein 2. (199 aa)
GNAT2Guanine nucleotide-binding protein G(T) subunit alpha-2 isoform X1. (354 aa)
RDH12Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (315 aa)
RS1Retinoschisin. (224 aa)
ENSEEUP00000003295annotation not available (498 aa)
TULP1Tubby-like protein; Belongs to the TUB family. (540 aa)
MYO7AUnconventional myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2199 aa)
PRPH2Peripherin-2. (346 aa)
GNAT1Guanine nucleotide-binding protein G(T) subunit alpha-1. (251 aa)
LOC103114259LOW QUALITY PROTEIN: uncharacterized protein C2orf71 homolog. (1224 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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