14 items (Erinaceus europaeus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	DDX20	Probable ATP-dependent RNA helicase DDX20. (483 aa)
	ENSEEUP00000001752	annotation not available (65 aa)
	GEMIN6	Gem-associated protein 6. (167 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (89 aa)
	GEMIN4	Gem-associated protein 4. (1059 aa)
	SNRPG	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
	STRAP	Serine-threonine kinase receptor-associated protein. (350 aa)
	GEMIN2	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (278 aa)
	GEMIN5	Gem-associated protein 5. (1436 aa)
	GEMIN8	Gem-associated protein 8. (308 aa)
	FMR1	Fragile X mental retardation protein 1 isoform X5. (632 aa)
	SNRPD3	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (125 aa)
	SNRPB	Small nuclear ribonucleoprotein-associated protein B; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes (By similarity). Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing (By similarity). (284 aa)
	SMN1	Survival motor neuron protein. (248 aa)

Your Current Organism:

Erinaceus europaeus

NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX20	ENSEEUP00000001752	ENSEEUP00000000427	ENSEEUP00000001752	Probable ATP-dependent RNA helicase DDX20.	annotation not available	0.766
DDX20	FMR1	ENSEEUP00000000427	ENSEEUP00000014031	Probable ATP-dependent RNA helicase DDX20.	Fragile X mental retardation protein 1 isoform X5.	0.418
DDX20	GEMIN2	ENSEEUP00000000427	ENSEEUP00000007683	Probable ATP-dependent RNA helicase DDX20.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.966
DDX20	GEMIN4	ENSEEUP00000000427	ENSEEUP00000005877	Probable ATP-dependent RNA helicase DDX20.	Gem-associated protein 4.	0.993
DDX20	GEMIN5	ENSEEUP00000000427	ENSEEUP00000011139	Probable ATP-dependent RNA helicase DDX20.	Gem-associated protein 5.	0.992
DDX20	GEMIN6	ENSEEUP00000000427	ENSEEUP00000004282	Probable ATP-dependent RNA helicase DDX20.	Gem-associated protein 6.	0.936
DDX20	GEMIN8	ENSEEUP00000000427	ENSEEUP00000013874	Probable ATP-dependent RNA helicase DDX20.	Gem-associated protein 8.	0.991
DDX20	SMN1	ENSEEUP00000000427	ENSEEUP00000014406	Probable ATP-dependent RNA helicase DDX20.	Survival motor neuron protein.	0.994
DDX20	SNRPB	ENSEEUP00000000427	ENSEEUP00000014212	Probable ATP-dependent RNA helicase DDX20.	Small nuclear ribonucleoprotein-associated protein B; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes (By similarity). Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing (By similarity).	0.572
DDX20	SNRPD1	ENSEEUP00000000427	ENSEEUP00000004528	Probable ATP-dependent RNA helicase DDX20.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.822
DDX20	SNRPD3	ENSEEUP00000000427	ENSEEUP00000014155	Probable ATP-dependent RNA helicase DDX20.	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.802
DDX20	SNRPG	ENSEEUP00000000427	ENSEEUP00000006340	Probable ATP-dependent RNA helicase DDX20.	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.	0.766
DDX20	STRAP	ENSEEUP00000000427	ENSEEUP00000007362	Probable ATP-dependent RNA helicase DDX20.	Serine-threonine kinase receptor-associated protein.	0.979
ENSEEUP00000001752	DDX20	ENSEEUP00000001752	ENSEEUP00000000427	annotation not available	Probable ATP-dependent RNA helicase DDX20.	0.766
ENSEEUP00000001752	GEMIN2	ENSEEUP00000001752	ENSEEUP00000007683	annotation not available	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.923
ENSEEUP00000001752	GEMIN4	ENSEEUP00000001752	ENSEEUP00000005877	annotation not available	Gem-associated protein 4.	0.543
ENSEEUP00000001752	GEMIN5	ENSEEUP00000001752	ENSEEUP00000011139	annotation not available	Gem-associated protein 5.	0.691
ENSEEUP00000001752	GEMIN6	ENSEEUP00000001752	ENSEEUP00000004282	annotation not available	Gem-associated protein 6.	0.577
ENSEEUP00000001752	GEMIN8	ENSEEUP00000001752	ENSEEUP00000013874	annotation not available	Gem-associated protein 8.	0.657
ENSEEUP00000001752	SMN1	ENSEEUP00000001752	ENSEEUP00000014406	annotation not available	Survival motor neuron protein.	0.925