STRINGSTRING
OGFOD1 OGFOD1 HOXD10 HOXD10 EDC4 EDC4 PIWIL1 PIWIL1 PUM1 PUM1 PSMC2 PSMC2 DYRK3 DYRK3 HNRNPU HNRNPU ENSEEUP00000004034 ENSEEUP00000004034 TNRC6A TNRC6A IGF2BP3 IGF2BP3 DHX9 DHX9 DDX28 DDX28 ENSEEUP00000004603 ENSEEUP00000004603 TRIM71 TRIM71 KPNB1 KPNB1 PATL2 PATL2 LOC103126981 LOC103126981 MAP1LC3C MAP1LC3C AGO1 AGO1 YBX1 YBX1 ZC3H12C ZC3H12C ENSEEUP00000005228 ENSEEUP00000005228 SAMD4A SAMD4A DCP2 DCP2 ZC3H12A ZC3H12A PIWIL2 PIWIL2 PABPC1L PABPC1L FASTKD3 FASTKD3 CNOT1 CNOT1 TRIM21 TRIM21 IQGAP1 IQGAP1 CAPRIN1 CAPRIN1 FXR1 FXR1 SNRPG SNRPG AGO3 AGO3 RNF135 RNF135 ENSEEUP00000006512 ENSEEUP00000006512 RPUSD3 RPUSD3 POLR2G POLR2G YTHDF1 YTHDF1 LOC103116761 LOC103116761 UPF2 UPF2 DCP1B DCP1B ZFAND1 ZFAND1 DCPS DCPS CHTOP CHTOP LARP4B LARP4B NUFIP2 NUFIP2 ROCK1 ROCK1 MOV10L1 MOV10L1 PRKAA2 PRKAA2 ENSEEUP00000007832 ENSEEUP00000007832 TNRC6B TNRC6B TRUB2 TRUB2 ATXN2L ATXN2L GRB7 GRB7 MBNL1 MBNL1 LOC103116715 LOC103116715 IGF2BP2 IGF2BP2 NBDY NBDY MEX3A MEX3A NANOS3 NANOS3 NANOS2 NANOS2 DCP1A DCP1A TNRC6C TNRC6C DHX30 DHX30 TDRD1 TDRD1 EIF2S1 EIF2S1 SMG1 SMG1 ENSEEUP00000009508 ENSEEUP00000009508 ENSEEUP00000009564 ENSEEUP00000009564 DHX36 DHX36 ENSEEUP00000009600 ENSEEUP00000009600 ENSEEUP00000009667 ENSEEUP00000009667 TBRG4 TBRG4 ENSEEUP00000009895 ENSEEUP00000009895 DDX25 DDX25 IGF2BP1 IGF2BP1 CNOT7 CNOT7 PATL1 PATL1 CNOT8 CNOT8 SAMD4B SAMD4B UHMK1 UHMK1 ENSEEUP00000010330 ENSEEUP00000010330 YTHDF2 YTHDF2 C9orf72 C9orf72 ENSEEUP00000010739 ENSEEUP00000010739 TIAL1 TIAL1 GABPB1 GABPB1 WTIP WTIP ZNFX1 ZNFX1 G3BP1 G3BP1 DDX4 DDX4 TDRD15 TDRD15 SNCAIP SNCAIP CDK9 CDK9 G3BP2 G3BP2 FXR2 FXR2 ENSEEUP00000012293 ENSEEUP00000012293 NOCT NOCT SNRPB2 SNRPB2 RPUSD4 RPUSD4 MAEL MAEL PMS2 PMS2 TRIM25 TRIM25 CASC3 CASC3 ENSEEUP00000000077 ENSEEUP00000000077 PNRC2 PNRC2 STAU1 STAU1 ATXN2 ATXN2 PAN3 PAN3 RC3H1 RC3H1 POLI POLI INA INA ENSEEUP00000013630 ENSEEUP00000013630 NFKBIZ NFKBIZ TDRD7 TDRD7 STAU2 STAU2 LSM1 LSM1 FASTKD2 FASTKD2 ASZ1 ASZ1 FMR1 FMR1 ENSEEUP00000014206 ENSEEUP00000014206 LSM14A LSM14A HABP4 HABP4 SQSTM1 SQSTM1 TDRKH TDRKH ENSEEUP00000000236 ENSEEUP00000000236 LARP4 LARP4 ENSEEUP00000000443 ENSEEUP00000000443 KHNYN KHNYN NYNRIN NYNRIN PSMA4 PSMA4 AGO4 AGO4 PAN2 PAN2 ENSEEUP00000000863 ENSEEUP00000000863 VCP VCP GRSF1 GRSF1 LARP1 LARP1 POLDIP3 POLDIP3 ENSEEUP00000001364 ENSEEUP00000001364 DDX1 DDX1 NSUN2 NSUN2 CNOT9 CNOT9 ENSEEUP00000001752 ENSEEUP00000001752 LSM6 LSM6 RBPMS RBPMS ENSEEUP00000002396 ENSEEUP00000002396 USP3 USP3 PABPC1 PABPC1 DDX3X DDX3X DDX6 DDX6 CARHSP1 CARHSP1 GIGYF2 GIGYF2 TIA1 TIA1 PABPC4 PABPC4 RPTOR RPTOR CNOT2 CNOT2 TDRD5 TDRD5 ZC3H12B ZC3H12B ENSEEUP00000002890 ENSEEUP00000002890 PUM2 PUM2 HAX1 HAX1 SERPINB1 SERPINB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OGFOD1Prolyl 3-hydroxylase OGFOD1-like. (544 aa)
HOXD10Homeobox protein Hox-D10. (340 aa)
EDC4Enhancer of mRNA-decapping protein 4. (1396 aa)
PIWIL1Piwi-like protein 1 isoform X1; Belongs to the argonaute family. (860 aa)
PUM1Pumilio homolog 1 isoform X4. (1221 aa)
PSMC226S protease regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
DYRK3Dual specificity tyrosine-phosphorylation-regulated kinase 3. (587 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (550 aa)
ENSEEUP00000004034annotation not available (455 aa)
TNRC6ATrinucleotide repeat-containing gene 6A protein isoform X1. (1934 aa)
IGF2BP3Insulin like growth factor 2 mRNA binding protein 3. (579 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1265 aa)
DDX28Probable ATP-dependent RNA helicase DDX28. (428 aa)
ENSEEUP00000004603annotation not available (756 aa)
TRIM71E3 ubiquitin-protein ligase TRIM71. (566 aa)
KPNB1Importin subunit beta-1. (843 aa)
PATL2PAT1 homolog 2. (441 aa)
LOC103126981UPF0692 protein C19orf54 homolog. (179 aa)
MAP1LC3CMicrotubule-associated proteins 1A/1B light chain 3C. (148 aa)
AGO1Protein argonaute-1; Belongs to the argonaute family. (857 aa)
YBX1Nuclease-sensitive element-binding protein 1. (246 aa)
ZC3H12CProbable ribonuclease ZC3H12C. (571 aa)
ENSEEUP00000005228annotation not available (95 aa)
SAMD4ASterile alpha motif domain containing 4A. (718 aa)
DCP2m7GpppN-mRNA hydrolase isoform X1. (423 aa)
ZC3H12ARibonuclease ZC3H12A. (500 aa)
PIWIL2Piwi-like protein 2; Belongs to the argonaute family. (882 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (611 aa)
FASTKD3FAST kinase domain-containing protein 3 isoform X2. (666 aa)
CNOT1CCR4-NOT transcription complex subunit 1 isoform X4. (2375 aa)
TRIM21E3 ubiquitin-protein ligase TRIM21. (477 aa)
IQGAP1Ras GTPase-activating-like protein IQGAP1. (1638 aa)
CAPRIN1Caprin-1. (641 aa)
FXR1Fragile X mental retardation syndrome-related protein 1 isoform X4. (621 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
AGO3Protein argonaute-3; Belongs to the argonaute family. (860 aa)
RNF135E3 ubiquitin-protein ligase RNF135. (427 aa)
ENSEEUP00000006512annotation not available (769 aa)
RPUSD3RNA pseudouridylate synthase domain-containing protein 3. (354 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
YTHDF1YTH domain-containing family protein 1 isoform X2. (515 aa)
LOC103116761LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1-like. (349 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1264 aa)
DCP1BmRNA-decapping enzyme 1B. (537 aa)
ZFAND1AN1-type zinc finger protein 1 isoform X1. (215 aa)
DCPSm7GpppX diphosphatase. (337 aa)
CHTOPChromatin target of PRMT1 protein isoform X2. (226 aa)
LARP4BLa-related protein 4B isoform X1. (748 aa)
NUFIP2Nuclear fragile X mental retardation-interacting protein 2. (599 aa)
ROCK1Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1295 aa)
MOV10L1RNA helicase Mov10l1. (1013 aa)
PRKAA2Non-specific serine/threonine protein kinase. (520 aa)
ENSEEUP00000007832annotation not available (853 aa)
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X4. (1706 aa)
TRUB2Probable tRNA pseudouridine synthase 2. (329 aa)
ATXN2LAtaxin-2-like protein isoform X1. (940 aa)
GRB7Growth factor receptor-bound protein 7 isoform X4. (430 aa)
MBNL1Muscleblind-like protein 1 isoform X1. (386 aa)
LOC103116715ATP-dependent RNA helicase DDX19B isoform X1. (478 aa)
IGF2BP2Insulin-like growth factor 2 mRNA-binding protein 2 isoform X1. (539 aa)
NBDYNegative regulator of P-body association. (68 aa)
MEX3ARNA-binding protein MEX3A. (284 aa)
NANOS3Nanos homolog 3; Belongs to the nanos family. (168 aa)
NANOS2Nanos homolog 2; Belongs to the nanos family. (138 aa)
DCP1AmRNA-decapping enzyme 1A isoform X1. (556 aa)
TNRC6CTrinucleotide repeat-containing gene 6C protein isoform X2. (1733 aa)
DHX30Putative ATP-dependent RNA helicase DHX30. (989 aa)
TDRD1Tudor domain-containing protein 1. (1190 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1. (315 aa)
SMG1Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (3662 aa)
ENSEEUP00000009508annotation not available (1867 aa)
ENSEEUP00000009564annotation not available (2098 aa)
DHX36ATP-dependent RNA helicase DHX36 isoform X1. (1007 aa)
ENSEEUP00000009600annotation not available (235 aa)
ENSEEUP00000009667annotation not available (246 aa)
TBRG4Protein TBRG4. (632 aa)
ENSEEUP00000009895annotation not available (92 aa)
DDX25ATP-dependent RNA helicase DDX25 isoform X1. (460 aa)
IGF2BP1Insulin-like growth factor 2 mRNA-binding protein 1 isoform X1. (577 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (242 aa)
PATL1Protein PAT1 homolog 1. (720 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (188 aa)
SAMD4BProtein Smaug homolog 2 isoform X1. (648 aa)
UHMK1Serine/threonine-protein kinase Kist isoform X1. (418 aa)
ENSEEUP00000010330annotation not available (1001 aa)
YTHDF2LOW QUALITY PROTEIN: YTH domain-containing family protein 2. (579 aa)
C9orf72Protein C9orf72 homolog. (481 aa)
ENSEEUP00000010739annotation not available (873 aa)
TIAL1Nucleolysin TIAR isoform X4. (381 aa)
GABPB1GA-binding protein subunit beta-1 isoform X1. (395 aa)
WTIPWilms tumor protein 1-interacting protein. (161 aa)
ZNFX1NFX1-type zinc finger-containing protein 1. (1915 aa)
G3BP1Ras GTPase-activating protein-binding protein 1. (463 aa)
DDX4Probable ATP-dependent RNA helicase DDX4 isoform X2; Belongs to the DEAD box helicase family. (724 aa)
TDRD15Tudor domain-containing protein 15. (769 aa)
SNCAIPSynphilin-1 isoform X1. (997 aa)
CDK9Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (419 aa)
G3BP2Ras GTPase-activating protein-binding protein 2 isoform X1. (482 aa)
FXR2Fragile X mental retardation syndrome-related protein 2. (676 aa)
ENSEEUP00000012293annotation not available (133 aa)
NOCTNocturnin. (272 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'. (225 aa)
RPUSD4RNA pseudouridylate synthase domain-containing protein 4. (375 aa)
MAELProtein maelstrom homolog isoform X1. (427 aa)
PMS2Mismatch repair endonuclease PMS2. (845 aa)
TRIM25E3 ubiquitin/ISG15 ligase TRIM25. (635 aa)
CASC3Protein CASC3. (511 aa)
ENSEEUP00000000077annotation not available (504 aa)
PNRC2Proline-rich nuclear receptor coactivator 2. (137 aa)
STAU1Double-stranded RNA-binding protein Staufen homolog 1 isoform X2. (577 aa)
ATXN2Ataxin-2. (1069 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (701 aa)
RC3H1Roquin-1 isoform X1. (1078 aa)
POLIDNA polymerase iota. (383 aa)
INAAlpha-internexin; Belongs to the intermediate filament family. (438 aa)
ENSEEUP00000013630annotation not available (102 aa)
NFKBIZNF-kappa-B inhibitor zeta isoform X2. (622 aa)
TDRD7Tudor domain-containing protein 7. (1099 aa)
STAU2Double-stranded RNA-binding protein Staufen homolog 2-like. (569 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (99 aa)
FASTKD2FAST kinase domain-containing protein 2. (451 aa)
ASZ1Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 isoform X1. (425 aa)
FMR1Fragile X mental retardation protein 1 isoform X5. (632 aa)
ENSEEUP00000014206annotation not available (760 aa)
LSM14AProtein LSM14 homolog A isoform X1. (456 aa)
HABP4Hyaluronan binding protein 4. (406 aa)
SQSTM1Sequestosome 1. (373 aa)
TDRKHTudor and KH domain containing. (546 aa)
ENSEEUP00000000236annotation not available (1083 aa)
LARP4La-related protein 4 isoform X4. (724 aa)
ENSEEUP00000000443annotation not available (608 aa)
KHNYNProtein KHNYN isoform X1. (658 aa)
NYNRINProtein NYNRIN. (409 aa)
PSMA4Proteasome subunit alpha type. (245 aa)
AGO4Argonaute RISC component 4. (861 aa)
PAN2poly(A) specific ribonuclease subunit PAN2. (1191 aa)
ENSEEUP00000000863annotation not available (173 aa)
VCPValosin containing protein. (806 aa)
GRSF1G-rich sequence factor 1 isoform X1. (359 aa)
LARP1La-related protein 1. (930 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X2. (362 aa)
ENSEEUP00000001364annotation not available (117 aa)
DDX1ATP-dependent RNA helicase DDX1. (730 aa)
NSUN2tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (477 aa)
CNOT9Cell differentiation protein RCD1 homolog. (234 aa)
ENSEEUP00000001752annotation not available (65 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (78 aa)
RBPMSRNA-binding protein with multiple splicing isoform X2. (214 aa)
ENSEEUP00000002396annotation not available (578 aa)
USP3Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (484 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (567 aa)
DDX3XATP-dependent RNA helicase DDX3X isoform X4; Belongs to the DEAD box helicase family. (647 aa)
DDX6Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. (421 aa)
CARHSP1Calcium-regulated heat stable protein 1. (93 aa)
GIGYF2PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1. (1327 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (389 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (656 aa)
RPTORRegulatory-associated protein of mTOR isoform X1. (1215 aa)
CNOT2CCR4-NOT transcription complex subunit 2. (540 aa)
TDRD5Tudor domain-containing protein 5. (956 aa)
ZC3H12BProbable ribonuclease ZC3H12B. (446 aa)
ENSEEUP00000002890annotation not available (756 aa)
PUM2Pumilio homolog 2 isoform X3. (1066 aa)
HAX1HCLS1-associated protein X-1; Recruits the Arp2/3 complex to the cell cortex and regulates reorganization of the cortical actin cytoskeleton via its interaction with KCNC3 and the Arp2/3 complex. Slows down the rate of inactivation of KCNC3 channels. Promotes GNA13-mediated cell migration. Involved in the clathrin-mediated endocytosis pathway. May be involved in internalization of ABC transporters such as ABCB11. May inhibit CASP9 and CASP3. Promotes cell survival. May regulate intracellular calcium pools. (202 aa)
SERPINB1Serpin family B member 1. (379 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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