STRINGSTRING
TNRC6B TNRC6B ENSEEUP00000007832 ENSEEUP00000007832 PRKAA2 PRKAA2 MOV10L1 MOV10L1 ROCK1 ROCK1 NUFIP2 NUFIP2 LARP4B LARP4B CHTOP CHTOP DCPS DCPS ZFAND1 ZFAND1 DCP1B DCP1B UPF2 UPF2 LOC103116761 LOC103116761 YTHDF1 YTHDF1 POLR2G POLR2G ENSEEUP00000006512 ENSEEUP00000006512 RNF135 RNF135 AGO3 AGO3 SNRPG SNRPG FXR1 FXR1 CAPRIN1 CAPRIN1 IQGAP1 IQGAP1 TRIM21 TRIM21 CNOT1 CNOT1 PABPC1L PABPC1L PIWIL2 PIWIL2 ZC3H12A ZC3H12A DCP2 DCP2 SAMD4A SAMD4A POLI POLI INA INA ENSEEUP00000013630 ENSEEUP00000013630 PATL1 PATL1 CNOT7 CNOT7 IGF2BP1 IGF2BP1 DDX25 DDX25 ENSEEUP00000009895 ENSEEUP00000009895 ENSEEUP00000009667 ENSEEUP00000009667 ENSEEUP00000009600 ENSEEUP00000009600 DHX36 DHX36 ENSEEUP00000009564 ENSEEUP00000009564 ENSEEUP00000009508 ENSEEUP00000009508 SMG1 SMG1 EIF2S1 EIF2S1 TDRD1 TDRD1 TNRC6C TNRC6C DCP1A DCP1A NANOS2 NANOS2 NANOS3 NANOS3 MEX3A MEX3A NBDY NBDY IGF2BP2 IGF2BP2 LOC103116715 LOC103116715 MBNL1 MBNL1 GRB7 GRB7 ATXN2L ATXN2L ATXN2 ATXN2 STAU1 STAU1 PNRC2 PNRC2 CASC3 CASC3 TRIM25 TRIM25 PMS2 PMS2 MAEL MAEL SNRPB2 SNRPB2 ENSEEUP00000001752 ENSEEUP00000001752 CNOT9 CNOT9 NSUN2 NSUN2 DDX1 DDX1 ENSEEUP00000001364 ENSEEUP00000001364 POLDIP3 POLDIP3 LARP1 LARP1 VCP VCP ENSEEUP00000000863 ENSEEUP00000000863 PAN2 PAN2 AGO4 AGO4 PSMA4 PSMA4 NYNRIN NYNRIN KHNYN KHNYN ENSEEUP00000000443 ENSEEUP00000000443 LARP4 LARP4 ENSEEUP00000000077 ENSEEUP00000000077 NFKBIZ NFKBIZ ENSEEUP00000005228 ENSEEUP00000005228 ZC3H12C ZC3H12C YBX1 YBX1 AGO1 AGO1 MAP1LC3C MAP1LC3C LOC103126981 LOC103126981 PATL2 PATL2 KPNB1 KPNB1 TRIM71 TRIM71 ENSEEUP00000004603 ENSEEUP00000004603 DHX9 DHX9 IGF2BP3 IGF2BP3 TNRC6A TNRC6A ENSEEUP00000004034 ENSEEUP00000004034 HNRNPU HNRNPU DYRK3 DYRK3 PSMC2 PSMC2 PUM1 PUM1 PIWIL1 PIWIL1 EDC4 EDC4 HOXD10 HOXD10 OGFOD1 OGFOD1 SERPINB1 SERPINB1 HAX1 HAX1 PUM2 PUM2 ENSEEUP00000002890 ENSEEUP00000002890 ZC3H12B ZC3H12B TDRD5 TDRD5 CNOT2 CNOT2 RPTOR RPTOR PABPC4 PABPC4 TIA1 TIA1 GIGYF2 GIGYF2 CARHSP1 CARHSP1 DDX6 DDX6 DDX3X DDX3X PABPC1 PABPC1 USP3 USP3 ENSEEUP00000002396 ENSEEUP00000002396 RBPMS RBPMS LSM6 LSM6 STAU2 STAU2 LSM1 LSM1 ASZ1 ASZ1 FMR1 FMR1 NOCT NOCT ENSEEUP00000012293 ENSEEUP00000012293 FXR2 FXR2 G3BP2 G3BP2 TDRKH TDRKH SQSTM1 SQSTM1 HABP4 HABP4 LSM14A LSM14A ENSEEUP00000014206 ENSEEUP00000014206 CDK9 CDK9 SNCAIP SNCAIP TDRD15 TDRD15 DDX4 DDX4 G3BP1 G3BP1 ZNFX1 ZNFX1 WTIP WTIP GABPB1 GABPB1 TIAL1 TIAL1 C9orf72 C9orf72 YTHDF2 YTHDF2 ENSEEUP00000010330 ENSEEUP00000010330 UHMK1 UHMK1 SAMD4B SAMD4B CNOT8 CNOT8 PAN3 PAN3 RC3H1 RC3H1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X4. (1706 aa)
ENSEEUP00000007832annotation not available (853 aa)
PRKAA2Non-specific serine/threonine protein kinase. (520 aa)
MOV10L1RNA helicase Mov10l1. (1013 aa)
ROCK1Rho-associated protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1295 aa)
NUFIP2Nuclear fragile X mental retardation-interacting protein 2. (599 aa)
LARP4BLa-related protein 4B isoform X1. (748 aa)
CHTOPChromatin target of PRMT1 protein isoform X2. (226 aa)
DCPSm7GpppX diphosphatase. (337 aa)
ZFAND1AN1-type zinc finger protein 1 isoform X1. (215 aa)
DCP1BmRNA-decapping enzyme 1B. (537 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1264 aa)
LOC103116761LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1-like. (349 aa)
YTHDF1YTH domain-containing family protein 1 isoform X2. (515 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
ENSEEUP00000006512annotation not available (769 aa)
RNF135E3 ubiquitin-protein ligase RNF135. (427 aa)
AGO3Protein argonaute-3; Belongs to the argonaute family. (860 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
FXR1Fragile X mental retardation syndrome-related protein 1 isoform X4. (621 aa)
CAPRIN1Caprin-1. (641 aa)
IQGAP1Ras GTPase-activating-like protein IQGAP1. (1638 aa)
TRIM21E3 ubiquitin-protein ligase TRIM21. (477 aa)
CNOT1CCR4-NOT transcription complex subunit 1 isoform X4. (2375 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (611 aa)
PIWIL2Piwi-like protein 2; Belongs to the argonaute family. (882 aa)
ZC3H12ARibonuclease ZC3H12A. (500 aa)
DCP2m7GpppN-mRNA hydrolase isoform X1. (423 aa)
SAMD4ASterile alpha motif domain containing 4A. (718 aa)
POLIDNA polymerase iota. (383 aa)
INAAlpha-internexin; Belongs to the intermediate filament family. (438 aa)
ENSEEUP00000013630annotation not available (102 aa)
PATL1Protein PAT1 homolog 1. (720 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (242 aa)
IGF2BP1Insulin-like growth factor 2 mRNA-binding protein 1 isoform X1. (577 aa)
DDX25ATP-dependent RNA helicase DDX25 isoform X1. (460 aa)
ENSEEUP00000009895annotation not available (92 aa)
ENSEEUP00000009667annotation not available (246 aa)
ENSEEUP00000009600annotation not available (235 aa)
DHX36ATP-dependent RNA helicase DHX36 isoform X1. (1007 aa)
ENSEEUP00000009564annotation not available (2098 aa)
ENSEEUP00000009508annotation not available (1867 aa)
SMG1Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (3662 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1. (315 aa)
TDRD1Tudor domain-containing protein 1. (1190 aa)
TNRC6CTrinucleotide repeat-containing gene 6C protein isoform X2. (1733 aa)
DCP1AmRNA-decapping enzyme 1A isoform X1. (556 aa)
NANOS2Nanos homolog 2; Belongs to the nanos family. (138 aa)
NANOS3Nanos homolog 3; Belongs to the nanos family. (168 aa)
MEX3ARNA-binding protein MEX3A. (284 aa)
NBDYNegative regulator of P-body association. (68 aa)
IGF2BP2Insulin-like growth factor 2 mRNA-binding protein 2 isoform X1. (539 aa)
LOC103116715ATP-dependent RNA helicase DDX19B isoform X1. (478 aa)
MBNL1Muscleblind-like protein 1 isoform X1. (386 aa)
GRB7Growth factor receptor-bound protein 7 isoform X4. (430 aa)
ATXN2LAtaxin-2-like protein isoform X1. (940 aa)
ATXN2Ataxin-2. (1069 aa)
STAU1Double-stranded RNA-binding protein Staufen homolog 1 isoform X2. (577 aa)
PNRC2Proline-rich nuclear receptor coactivator 2. (137 aa)
CASC3Protein CASC3. (511 aa)
TRIM25E3 ubiquitin/ISG15 ligase TRIM25. (635 aa)
PMS2Mismatch repair endonuclease PMS2. (845 aa)
MAELProtein maelstrom homolog isoform X1. (427 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'. (225 aa)
ENSEEUP00000001752annotation not available (65 aa)
CNOT9Cell differentiation protein RCD1 homolog. (234 aa)
NSUN2tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (477 aa)
DDX1ATP-dependent RNA helicase DDX1. (730 aa)
ENSEEUP00000001364annotation not available (117 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X2. (362 aa)
LARP1La-related protein 1. (930 aa)
VCPValosin containing protein. (806 aa)
ENSEEUP00000000863annotation not available (173 aa)
PAN2poly(A) specific ribonuclease subunit PAN2. (1191 aa)
AGO4Argonaute RISC component 4. (861 aa)
PSMA4Proteasome subunit alpha type. (245 aa)
NYNRINProtein NYNRIN. (409 aa)
KHNYNProtein KHNYN isoform X1. (658 aa)
ENSEEUP00000000443annotation not available (608 aa)
LARP4La-related protein 4 isoform X4. (724 aa)
ENSEEUP00000000077annotation not available (504 aa)
NFKBIZNF-kappa-B inhibitor zeta isoform X2. (622 aa)
ENSEEUP00000005228annotation not available (95 aa)
ZC3H12CProbable ribonuclease ZC3H12C. (571 aa)
YBX1Nuclease-sensitive element-binding protein 1. (246 aa)
AGO1Protein argonaute-1; Belongs to the argonaute family. (857 aa)
MAP1LC3CMicrotubule-associated proteins 1A/1B light chain 3C. (148 aa)
LOC103126981UPF0692 protein C19orf54 homolog. (179 aa)
PATL2PAT1 homolog 2. (441 aa)
KPNB1Importin subunit beta-1. (843 aa)
TRIM71E3 ubiquitin-protein ligase TRIM71. (566 aa)
ENSEEUP00000004603annotation not available (756 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1265 aa)
IGF2BP3Insulin like growth factor 2 mRNA binding protein 3. (579 aa)
TNRC6ATrinucleotide repeat-containing gene 6A protein isoform X1. (1934 aa)
ENSEEUP00000004034annotation not available (455 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (550 aa)
DYRK3Dual specificity tyrosine-phosphorylation-regulated kinase 3. (587 aa)
PSMC226S protease regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
PUM1Pumilio homolog 1 isoform X4. (1221 aa)
PIWIL1Piwi-like protein 1 isoform X1; Belongs to the argonaute family. (860 aa)
EDC4Enhancer of mRNA-decapping protein 4. (1396 aa)
HOXD10Homeobox protein Hox-D10. (340 aa)
OGFOD1Prolyl 3-hydroxylase OGFOD1-like. (544 aa)
SERPINB1Serpin family B member 1. (379 aa)
HAX1HCLS1-associated protein X-1; Recruits the Arp2/3 complex to the cell cortex and regulates reorganization of the cortical actin cytoskeleton via its interaction with KCNC3 and the Arp2/3 complex. Slows down the rate of inactivation of KCNC3 channels. Promotes GNA13-mediated cell migration. Involved in the clathrin-mediated endocytosis pathway. May be involved in internalization of ABC transporters such as ABCB11. May inhibit CASP9 and CASP3. Promotes cell survival. May regulate intracellular calcium pools. (202 aa)
PUM2Pumilio homolog 2 isoform X3. (1066 aa)
ENSEEUP00000002890annotation not available (756 aa)
ZC3H12BProbable ribonuclease ZC3H12B. (446 aa)
TDRD5Tudor domain-containing protein 5. (956 aa)
CNOT2CCR4-NOT transcription complex subunit 2. (540 aa)
RPTORRegulatory-associated protein of mTOR isoform X1. (1215 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (656 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (389 aa)
GIGYF2PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1. (1327 aa)
CARHSP1Calcium-regulated heat stable protein 1. (93 aa)
DDX6Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family. (421 aa)
DDX3XATP-dependent RNA helicase DDX3X isoform X4; Belongs to the DEAD box helicase family. (647 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (567 aa)
USP3Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (484 aa)
ENSEEUP00000002396annotation not available (578 aa)
RBPMSRNA-binding protein with multiple splicing isoform X2. (214 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (78 aa)
STAU2Double-stranded RNA-binding protein Staufen homolog 2-like. (569 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (99 aa)
ASZ1Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 isoform X1. (425 aa)
FMR1Fragile X mental retardation protein 1 isoform X5. (632 aa)
NOCTNocturnin. (272 aa)
ENSEEUP00000012293annotation not available (133 aa)
FXR2Fragile X mental retardation syndrome-related protein 2. (676 aa)
G3BP2Ras GTPase-activating protein-binding protein 2 isoform X1. (482 aa)
TDRKHTudor and KH domain containing. (546 aa)
SQSTM1Sequestosome 1. (373 aa)
HABP4Hyaluronan binding protein 4. (406 aa)
LSM14AProtein LSM14 homolog A isoform X1. (456 aa)
ENSEEUP00000014206annotation not available (760 aa)
CDK9Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (419 aa)
SNCAIPSynphilin-1 isoform X1. (997 aa)
TDRD15Tudor domain-containing protein 15. (769 aa)
DDX4Probable ATP-dependent RNA helicase DDX4 isoform X2; Belongs to the DEAD box helicase family. (724 aa)
G3BP1Ras GTPase-activating protein-binding protein 1. (463 aa)
ZNFX1NFX1-type zinc finger-containing protein 1. (1915 aa)
WTIPWilms tumor protein 1-interacting protein. (161 aa)
GABPB1GA-binding protein subunit beta-1 isoform X1. (395 aa)
TIAL1Nucleolysin TIAR isoform X4. (381 aa)
C9orf72Protein C9orf72 homolog. (481 aa)
YTHDF2LOW QUALITY PROTEIN: YTH domain-containing family protein 2. (579 aa)
ENSEEUP00000010330annotation not available (1001 aa)
UHMK1Serine/threonine-protein kinase Kist isoform X1. (418 aa)
SAMD4BProtein Smaug homolog 2 isoform X1. (648 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (188 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (701 aa)
RC3H1Roquin-1 isoform X1. (1078 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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