STRINGSTRING
CHD8 CHD8 G3BP1 G3BP1 MTERF1 MTERF1 CHD7 CHD7 SLFNL1 SLFNL1 DSCC1 DSCC1 CHD9 CHD9 MCM2 MCM2 ENSEEUP00000013883 ENSEEUP00000013883 SMARCAD1 SMARCAD1 CHD3 CHD3 ERCC6L ERCC6L NBN NBN CHD6 CHD6 DNA2 DNA2 RFC4 RFC4 MRE11 MRE11 ENSEEUP00000007672 ENSEEUP00000007672 MCM4 MCM4 TOP1 TOP1 ENSEEUP00000007055 ENSEEUP00000007055 SUPV3L1 SUPV3L1 MCM7 MCM7 ANXA1 ANXA1 ENSEEUP00000006794 ENSEEUP00000006794 ENSEEUP00000006577 ENSEEUP00000006577 NAV2 NAV2 MCM8 MCM8 CHD1 CHD1 CDC45 CDC45 ENSEEUP00000005927 ENSEEUP00000005927 TOP2B TOP2B FANCM FANCM RTEL1 RTEL1 ENSEEUP00000004885 ENSEEUP00000004885 XRCC5 XRCC5 ENSEEUP00000004813 ENSEEUP00000004813 ENSEEUP00000004704 ENSEEUP00000004704 MCM3 MCM3 ENSEEUP00000004580 ENSEEUP00000004580 WRN WRN GINS4 GINS4 DHX9 DHX9 ENSEEUP00000004366 ENSEEUP00000004366 MCMDC2 MCMDC2 PIF1 PIF1 CHD1L CHD1L HELB HELB HHEX HHEX MCM6 MCM6 DDX3X DDX3X CHD5 CHD5 ENSEEUP00000002125 ENSEEUP00000002125 RPA1 RPA1 CHD2 CHD2 ABL1 ABL1 DDX1 DDX1 BLM BLM ENSEEUP00000001197 ENSEEUP00000001197 POLQ POLQ ERCC3 ERCC3 RAD50 RAD50 FBH1 FBH1 SUB1 SUB1 TWNK TWNK RFC3 RFC3 ENSEEUP00000008566 ENSEEUP00000008566 DERPC DERPC ASCC3 ASCC3 RECQL5 RECQL5 ENSEEUP00000009565 ENSEEUP00000009565 DHX36 DHX36 GINS2 GINS2 ERCC2 ERCC2 SSBP1 SSBP1 GTF2F2 GTF2F2 RECQL RECQL ZRANB3 ZRANB3 BRIP1 BRIP1 ENSEEUP00000010821 ENSEEUP00000010821 DDX11 DDX11 WRNIP1 WRNIP1 RUVBL1 RUVBL1 TOP3A TOP3A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CHD8Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2299 aa)
G3BP1Ras GTPase-activating protein-binding protein 1. (463 aa)
MTERF1Transcription termination factor 1, mitochondrial. (391 aa)
CHD7chromodomain-helicase-DNA-binding protein 7. (2994 aa)
SLFNL1Schlafen-like protein 1. (387 aa)
DSCC1DNA replication and sister chromatid cohesion 1. (279 aa)
CHD9chromodomain-helicase-DNA-binding protein 9 isoform X1. (2785 aa)
MCM2DNA helicase; Belongs to the MCM family. (536 aa)
ENSEEUP00000013883annotation not available (218 aa)
SMARCAD1annotation not available (1004 aa)
CHD3chromodomain-helicase-DNA-binding protein 3 isoform X4. (1962 aa)
ERCC6LDNA excision repair protein ERCC-6-like. (1241 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (753 aa)
CHD6chromodomain-helicase-DNA-binding protein 6. (2712 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (924 aa)
RFC4Replication factor C subunit 4. (363 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (656 aa)
ENSEEUP00000007672annotation not available (902 aa)
MCM4DNA helicase; Belongs to the MCM family. (829 aa)
TOP1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (741 aa)
ENSEEUP00000007055annotation not available (2488 aa)
SUPV3L1ATP-dependent RNA helicase SUPV3L1, mitochondrial. (783 aa)
MCM7Minichromosome maintenance complex component 7. (682 aa)
ANXA1Annexin. (338 aa)
ENSEEUP00000006794annotation not available (388 aa)
ENSEEUP00000006577annotation not available (598 aa)
NAV2Neuron navigator 2 isoform X1. (2467 aa)
MCM8DNA helicase MCM8 isoform X1; Belongs to the MCM family. (822 aa)
CHD1Chromodomain helicase DNA binding protein 1. (1710 aa)
CDC45Cell division control protein 45 homolog. (481 aa)
ENSEEUP00000005927annotation not available (647 aa)
TOP2BDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1601 aa)
FANCMFanconi anemia group M protein. (1962 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1276 aa)
ENSEEUP00000004885annotation not available (315 aa)
XRCC5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (625 aa)
ENSEEUP00000004813annotation not available (1112 aa)
ENSEEUP00000004704annotation not available (1610 aa)
MCM3DNA helicase; Belongs to the MCM family. (788 aa)
ENSEEUP00000004580annotation not available (624 aa)
WRNLOW QUALITY PROTEIN: Werner syndrome ATP-dependent helicase. (1264 aa)
GINS4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (224 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1265 aa)
ENSEEUP00000004366annotation not available (627 aa)
MCMDC2MCM domain-containing protein 2 isoform X2. (590 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (436 aa)
CHD1Lchromodomain-helicase-DNA-binding protein 1-like isoform X1. (873 aa)
HELBDNA helicase B. (1070 aa)
HHEXHematopoietically-expressed homeobox protein HHEX. (148 aa)
MCM6DNA helicase; Belongs to the MCM family. (820 aa)
DDX3XATP-dependent RNA helicase DDX3X isoform X4; Belongs to the DEAD box helicase family. (647 aa)
CHD5Chromodomain helicase DNA binding protein 5. (1924 aa)
ENSEEUP00000002125annotation not available (198 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
CHD2chromodomain-helicase-DNA-binding protein 2. (1635 aa)
ABL1Tyrosine-protein kinase. (925 aa)
DDX1ATP-dependent RNA helicase DDX1. (730 aa)
BLMBloom syndrome protein. (1383 aa)
ENSEEUP00000001197annotation not available (599 aa)
POLQDNA polymerase theta. (2561 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit isoform X1. (733 aa)
RAD50DNA repair protein RAD50 isoform X1. (1311 aa)
FBH1F-box DNA helicase 1 isoform X1. (977 aa)
SUB1Activated RNA polymerase II transcriptional coactivator p15. (102 aa)
TWNKTwinkle protein, mitochondrial. (682 aa)
RFC3Replication factor C subunit 3. (353 aa)
ENSEEUP00000008566annotation not available (709 aa)
DERPCChromosome transmission fidelity protein 8 homolog. (525 aa)
ASCC3Activating signal cointegrator 1 complex subunit 3. (1933 aa)
RECQL5ATP-dependent DNA helicase Q5. (979 aa)
ENSEEUP00000009565annotation not available (605 aa)
DHX36ATP-dependent RNA helicase DHX36 isoform X1. (1007 aa)
GINS2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit. (729 aa)
SSBP1Single-stranded DNA-binding protein, mitochondrial. (147 aa)
GTF2F2General transcription factor IIF subunit 2. (249 aa)
RECQLATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (483 aa)
ZRANB3DNA annealing helicase and endonuclease ZRANB3 isoform X1. (1000 aa)
BRIP1Fanconi anemia group J protein. (1239 aa)
ENSEEUP00000010821annotation not available (1785 aa)
DDX11Probable ATP-dependent DNA helicase DDX11. (801 aa)
WRNIP1ATPase WRNIP1 isoform X1. (533 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (338 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (943 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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