STRINGSTRING
A1CF A1CF RBM4B RBM4B MTHFSD MTHFSD LARP4 LARP4 DDX18 DDX18 ZCRB1 ZCRB1 PRKRA PRKRA LOC103126925 LOC103126925 SLTM SLTM NSUN4 NSUN4 RBMX2 RBMX2 AARS2 AARS2 PPIL4 PPIL4 GRSF1 GRSF1 LARP1 LARP1 SRSF3 SRSF3 TARBP2 TARBP2 RBM47 RBM47 TUT1 TUT1 POLDIP3 POLDIP3 SRP9 SRP9 KRR1 KRR1 SRP54 SRP54 ESRP1 ESRP1 NSUN2 NSUN2 RBM6 RBM6 CLUH CLUH RBM45 RBM45 ZRSR2 ZRSR2 SRP68 SRP68 RBPMS RBPMS SON SON RBM28 RBM28 SRSF11 SRSF11 PABPC1 PABPC1 RBM18 RBM18 SART3 SART3 PABPC4 PABPC4 RAVER2 RAVER2 NUDT21 NUDT21 SREK1 SREK1 REXO5 REXO5 TARDBP TARDBP CELF4 CELF4 LSM5 LSM5 AQR AQR MARF1 MARF1 HNRNPDL HNRNPDL DND1 DND1 RBM39 RBM39 SYNCRIP SYNCRIP RBFOX2 RBFOX2 PABPN1L PABPN1L GAR1 GAR1 NSUN5 NSUN5 DHX9 DHX9 FUS FUS EIF3A EIF3A NELFE NELFE NSUN7 NSUN7 HNRNPH3 HNRNPH3 AIMP1 AIMP1 SYNJ1 SYNJ1 RALY RALY ENOX2 ENOX2 EIF2AK2 EIF2AK2 RBM22 RBM22 CELF2 CELF2 SNRNP70 SNRNP70 EIF4E1B EIF4E1B NCL NCL RNPS1 RNPS1 CPSF7 CPSF7 DAZL DAZL RBM5 RBM5 PABPC1L PABPC1L LOC103125122 LOC103125122 RDM1 RDM1 SNRPE SNRPE DDX55 DDX55 HNRNPA3 HNRNPA3 AARS1 AARS1 DROSHA DROSHA MYEF2 MYEF2 RBM41 RBM41 METTL1 METTL1 SNRPG SNRPG RALYL RALYL SLIRP SLIRP RBM25 RBM25 LOC103123420 LOC103123420 HNRNPC HNRNPC HNRNPD HNRNPD RNMT RNMT ZRANB2 ZRANB2 ADAD2 ADAD2 MSI2 MSI2 MRPL44 MRPL44 LOC103116216 LOC103116216 RBM10 RBM10 NSUN6 NSUN6 LARP4B LARP4B SRSF4 SRSF4 NIFK NIFK NIP7 NIP7 CDKN2AIP CDKN2AIP ELAVL2 ELAVL2 ELAVL4 ELAVL4 EIF4E3 EIF4E3 PPARGC1A PPARGC1A SRSF1 SRSF1 TRNT1 TRNT1 SRSF2 SRSF2 IGF2BP2 IGF2BP2 XPOT XPOT CELF1 CELF1 TRA2B TRA2B NANOS3 NANOS3 NANOS2 NANOS2 LOC103118947 LOC103118947 PTBP2 PTBP2 DTD1 DTD1 HNRNPR HNRNPR ALYREF ALYREF PPIE PPIE MATR3 MATR3 RBM27 RBM27 HTATSF1 HTATSF1 STRBP STRBP CPEB4 CPEB4 NSUN3 NSUN3 IGF2BP1 IGF2BP1 SRSF12 SRSF12 DDX10 DDX10 UHMK1 UHMK1 THUMPD1 THUMPD1 PSPC1 PSPC1 XRN1 XRN1 SNRNP35 SNRNP35 NOP2 NOP2 CNOT4 CNOT4 RBM46 RBM46 LOC103121119 LOC103121119 DGCR8 DGCR8 TIAL1 TIAL1 TRMT2A TRMT2A CPEB2 CPEB2 G3BP1 G3BP1 RBM26 RBM26 RBM34 RBM34 LARP7 LARP7 DDX31 DDX31 LOC103125758 LOC103125758 RBM17 RBM17 RNPC3 RNPC3 HNRNPAB HNRNPAB RBM43 RBM43 HNRNPH1 HNRNPH1 NOL8 NOL8 G3BP2 G3BP2 RBM38 RBM38 SNRPF SNRPF ZNF638 ZNF638 U2SURP U2SURP SNRPB2 SNRPB2 RBFOX3 RBFOX3 RBM24 RBM24 TRMT1 TRMT1 TRMT1L TRMT1L NOL6 NOL6 PPRC1 PPRC1 SRSF10 SRSF10 RBMS3 RBMS3 STAU1 STAU1 EIF3B EIF3B NONO NONO PTBP3 PTBP3 SRSF7 SRSF7 RPS3 RPS3 SNRPC SNRPC THUMPD3 THUMPD3 ADAR ADAR HNRNPA2B1 HNRNPA2B1 TFB1M TFB1M PPARGC1B PPARGC1B CPSF6 CPSF6 STAU2 STAU2 SNRPA SNRPA EIF4E2 EIF4E2 LSM1 LSM1 SETD1B SETD1B RBM23 RBM23 SNRPB SNRPB ALKBH8 ALKBH8 TRA2A TRA2A EIF3D EIF3D SCAF4 SCAF4 RBM7 RBM7 ENOX1 ENOX1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1CFAPOBEC1 complementation factor isoform X2. (458 aa)
RBM4BRNA-binding protein 4B. (364 aa)
MTHFSDMethenyltetrahydrofolate synthase domain-containing protein. (374 aa)
LARP4La-related protein 4 isoform X4. (724 aa)
DDX18RNA helicase. (670 aa)
ZCRB1Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (215 aa)
PRKRAInterferon-inducible double-stranded RNA-dependent protein kinase activator A isoform X1. (311 aa)
LOC103126925Heterogeneous nuclear ribonucleoprotein A1-like. (267 aa)
SLTMSAFB-like transcription modulator. (975 aa)
NSUN45-methylcytosine rRNA methyltransferase NSUN4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (259 aa)
RBMX2RNA-binding motif protein, X-linked 2 isoform X1. (211 aa)
AARS2alanine--tRNA ligase, mitochondrial; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (984 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (490 aa)
GRSF1G-rich sequence factor 1 isoform X1. (359 aa)
LARP1La-related protein 1. (930 aa)
SRSF3Serine/arginine-rich splicing factor 3. (164 aa)
TARBP2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (313 aa)
RBM47RNA-binding protein 47 isoform X2. (589 aa)
TUT1Speckle targeted PIP5K1A-regulated poly(A) polymerase. (860 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X2. (362 aa)
SRP9Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. (85 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)
SRP54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (503 aa)
ESRP1Epithelial splicing regulatory protein 1 isoform X5. (594 aa)
NSUN2tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (477 aa)
RBM6RNA-binding protein 6 isoform X2. (1024 aa)
CLUHClustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. Specifically binds mRNAs of nuclear- encoded mitochondrial proteins in the cytoplasm and regulates transport or translation of these transcripts close to mitochondria, playing a role in mitochondrial biogenesis; Belongs to the CLU family. (926 aa)
RBM45RNA-binding protein 45 isoform X1. (249 aa)
ZRSR2U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (473 aa)
SRP68Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (548 aa)
RBPMSRNA-binding protein with multiple splicing isoform X2. (214 aa)
SONProtein SON isoform X8. (2377 aa)
RBM28RNA-binding protein 28 isoform X1. (761 aa)
SRSF11Serine/arginine-rich splicing factor 11 isoform X1. (482 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (567 aa)
RBM18Probable RNA-binding protein 18. (190 aa)
SART3Squamous cell carcinoma antigen recognized by T-cells 3 isoform X2. (965 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (656 aa)
RAVER2Ribonucleoprotein PTB-binding 2. (422 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
SREK1Splicing regulatory glutamine/lysine-rich protein 1 isoform X2. (609 aa)
REXO5Putative RNA exonuclease NEF-sp. (728 aa)
TARDBPTAR DNA-binding protein 43. (414 aa)
CELF4CUGBP Elav-like family member 4 isoform X2. (444 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (60 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1517 aa)
MARF1Meiosis arrest female protein 1 isoform X1. (1719 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D-like isoform X1. (417 aa)
DND1Dead end protein homolog 1. (353 aa)
RBM39RNA-binding protein 39 isoform X3. (530 aa)
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X7. (605 aa)
RBFOX2RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (374 aa)
PABPN1LEmbryonic polyadenylate-binding protein 2. (236 aa)
GAR1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (223 aa)
NSUN5Probable 28S rRNA (Cytosine-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (453 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1265 aa)
FUSRNA-binding protein FUS isoform X1. (519 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (1285 aa)
NELFENegative elongation factor E isoform X1. (382 aa)
NSUN7Putative methyltransferase NSUN7; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (722 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3 isoform X4. (347 aa)
AIMP1Aminoacyl tRNA synthase complex-interacting multifunctional protein 1. (276 aa)
SYNJ1Synaptojanin-1 isoform X1. (1504 aa)
RALYRNA-binding protein Raly. (304 aa)
ENOX2ecto-NOX disulfide-thiol exchanger 2 isoform X3. (519 aa)
EIF2AK2Interferon-induced, double-stranded RNA-activated protein kinase. (484 aa)
RBM22pre-mRNA-splicing factor RBM22. (419 aa)
CELF2CUGBP Elav-like family member 2 isoform X3. (498 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa. (437 aa)
EIF4E1BEukaryotic translation initiation factor 4E type 1B-like; Belongs to the eukaryotic initiation factor 4E family. (193 aa)
NCLNucleolin isoform X2. (705 aa)
RNPS1RNA-binding protein with serine-rich domain 1 isoform X1. (305 aa)
CPSF7Cleavage and polyadenylation specificity factor subunit 7 isoform X1. (399 aa)
DAZLDeleted in azoospermia-like. (292 aa)
RBM5RNA-binding protein 5. (809 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (611 aa)
LOC103125122Heterogeneous nuclear ribonucleoprotein A1-like. (267 aa)
RDM1RAD52 motif-containing protein 1. (249 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (90 aa)
DDX55RNA helicase. (599 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3 isoform X1. (373 aa)
AARS1alanine--tRNA ligase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (965 aa)
DROSHARibonuclease 3. (1372 aa)
MYEF2Heterogeneous nuclear ribonucleoprotein M. (600 aa)
RBM41RNA-binding protein 41. (409 aa)
METTL1tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (235 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
RALYLRNA-binding Raly-like protein. (287 aa)
SLIRPSRA stem-loop-interacting RNA-binding protein, mitochondrial. (101 aa)
RBM25RNA-binding protein 25. (841 aa)
LOC103123420Small nuclear ribonucleoprotein-associated protein. (239 aa)
HNRNPCHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (308 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D0 isoform X1. (354 aa)
RNMTmRNA cap guanine-N7 methyltransferase. (462 aa)
ZRANB2Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (183 aa)
ADAD2Adenosine deaminase domain-containing protein 2. (633 aa)
MSI2RNA-binding protein Musashi homolog 2 isoform X2. (249 aa)
MRPL4439S ribosomal protein L44, mitochondrial. (330 aa)
LOC103116216Polyadenylate-binding protein 1-like 2. (200 aa)
RBM10RNA-binding protein 10 isoform X5. (918 aa)
NSUN6Putative methyltransferase NSUN6 isoform X2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (469 aa)
LARP4BLa-related protein 4B isoform X1. (748 aa)
SRSF4Serine/arginine-rich splicing factor 4 isoform X2. (486 aa)
NIFKMKI67 FHA domain-interacting nucleolar phosphoprotein isoform X1. (234 aa)
NIP760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
CDKN2AIPCDKN2A-interacting protein. (576 aa)
ELAVL2ELAV-like protein 2. (385 aa)
ELAVL4ELAV-like protein; Belongs to the RRM elav family. (385 aa)
EIF4E3Eukaryotic translation initiation factor 4E type 3; Belongs to the eukaryotic initiation factor 4E family. (141 aa)
PPARGC1APeroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X3. (780 aa)
SRSF1Serine/arginine-rich splicing factor 1 isoform X2. (292 aa)
TRNT1CCA tRNA nucleotidyltransferase 1, mitochondrial; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (434 aa)
SRSF2Serine/arginine-rich splicing factor 2 isoform X1. (218 aa)
IGF2BP2Insulin-like growth factor 2 mRNA-binding protein 2 isoform X1. (539 aa)
XPOTExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (963 aa)
CELF1CUGBP Elav-like family member 4 isoform X14. (485 aa)
TRA2BTransformer-2 protein homolog beta isoform X2. (248 aa)
NANOS3Nanos homolog 3; Belongs to the nanos family. (168 aa)
NANOS2Nanos homolog 2; Belongs to the nanos family. (138 aa)
LOC103118947Heterogeneous nuclear ribonucleoprotein A1-like. (258 aa)
PTBP2Polypyrimidine tract-binding protein 2 isoform X1. (534 aa)
DTD1D-aminoacyl-tRNA deacylase. (209 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R isoform X1. (511 aa)
ALYREFTHO complex subunit 4. (171 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (279 aa)
MATR3Matrin-3 isoform X3. (845 aa)
RBM27RNA-binding protein 27 isoform X2. (1057 aa)
HTATSF1HIV Tat-specific factor 1. (761 aa)
STRBPSpermatid perinuclear RNA-binding protein isoform X1. (669 aa)
CPEB4Cytoplasmic polyadenylation element-binding protein 4 isoform X1. (664 aa)
NSUN3Putative methyltransferase NSUN3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (338 aa)
IGF2BP1Insulin-like growth factor 2 mRNA-binding protein 1 isoform X1. (577 aa)
SRSF12Serine/arginine-rich splicing factor 12. (262 aa)
DDX10RNA helicase. (870 aa)
UHMK1Serine/threonine-protein kinase Kist isoform X1. (418 aa)
THUMPD1THUMP domain-containing protein 1. (413 aa)
PSPC1Paraspeckle component 1. (513 aa)
XRN15'-3' exoribonuclease 1. (1697 aa)
SNRNP35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (247 aa)
NOP2Probable 28S rRNA (Cytosine(4447)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (689 aa)
CNOT4CCR4-NOT transcription complex subunit 4 isoform X3. (752 aa)
RBM46LOW QUALITY PROTEIN: probable RNA-binding protein 46. (532 aa)
LOC103121119Heterogeneous nuclear ribonucleoprotein A1-like. (293 aa)
DGCR8Microprocessor complex subunit DGCR8. (746 aa)
TIAL1Nucleolysin TIAR isoform X4. (381 aa)
TRMT2AtRNA (Uracil-5-)-methyltransferase homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (608 aa)
CPEB2Cytoplasmic polyadenylation element-binding protein 2 isoform X1. (478 aa)
G3BP1Ras GTPase-activating protein-binding protein 1. (463 aa)
RBM26RNA-binding protein 26 isoform X3. (1005 aa)
RBM34RNA-binding protein 34. (423 aa)
LARP7La-related protein 7. (544 aa)
DDX31RNA helicase. (746 aa)
LOC103125758Polyadenylate-binding protein 2 isoform X1. (293 aa)
RBM17Splicing factor 45. (333 aa)
RNPC3RNA-binding protein 40 isoform X1. (64 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B isoform X1. (242 aa)
RBM43RNA-binding protein 43. (349 aa)
HNRNPH1Heterogeneous nuclear ribonucleoprotein H isoform X1. (361 aa)
NOL8Nucleolar protein 8. (1124 aa)
G3BP2Ras GTPase-activating protein-binding protein 2 isoform X1. (482 aa)
RBM38RNA-binding protein 38. (239 aa)
SNRPFSmall nuclear ribonucleoprotein F. (85 aa)
ZNF638Zinc finger protein 638. (1947 aa)
U2SURPU2 snRNP-associated SURP motif-containing protein isoform X1. (1028 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'. (225 aa)
RBFOX3RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (372 aa)
RBM24RNA-binding protein 24. (180 aa)
TRMT1tRNA (Guanine(26)-N(2))-dimethyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (395 aa)
TRMT1LTRMT1-like protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (696 aa)
NOL6Nucleolar protein 6. (960 aa)
PPRC1LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma coactivator-related protein 1. (1659 aa)
SRSF10Serine/arginine-rich splicing factor 10 isoform X1. (263 aa)
RBMS3RNA-binding motif, single-stranded-interacting protein 3 isoform X1. (393 aa)
STAU1Double-stranded RNA-binding protein Staufen homolog 1 isoform X2. (577 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form [...] (652 aa)
NONOnon-POU domain-containing octamer-binding protein isoform X2. (468 aa)
PTBP3Polypyrimidine tract-binding protein 3. (529 aa)
SRSF7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (175 aa)
THUMPD3THUMP domain-containing protein 3. (504 aa)
ADARDouble-stranded RNA-specific adenosine deaminase isoform X1. (1159 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1. (350 aa)
TFB1MrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (337 aa)
PPARGC1BPeroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1. (927 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6 isoform X1. (568 aa)
STAU2Double-stranded RNA-binding protein Staufen homolog 2-like. (569 aa)
SNRPAU1 small nuclear ribonucleoprotein A isoform X1. (282 aa)
EIF4E2Eukaryotic translation initiation factor 4E type 2 isoform X1; Belongs to the eukaryotic initiation factor 4E family. (254 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (99 aa)
SETD1BHistone-lysine N-methyltransferase SETD1B. (666 aa)
RBM23Probable RNA-binding protein 23 isoform X1. (444 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein B; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes (By similarity). Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing (By similarity). (284 aa)
ALKBH8Alkylated DNA repair protein alkB homolog 8 isoform X2. (466 aa)
TRA2ATransformer-2 protein homolog alpha isoform X1. (282 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, a complex required for several steps in the initiation of protein synthesis of a specialized repertoire of mRNAs. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl- tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required [...] (546 aa)
SCAF4Splicing factor, arginine/serine-rich 15 isoform X1. (1124 aa)
RBM7RNA-binding protein 7 isoform X3. (261 aa)
ENOX1ecto-NOX disulfide-thiol exchanger 1. (643 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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