STRINGSTRING
NUP50 NUP50 NUP214 NUP214 DDX20 DDX20 ENSEEUP00000000875 ENSEEUP00000000875 NUP210 NUP210 NUP37 NUP37 TGS1 TGS1 ENSEEUP00000001752 ENSEEUP00000001752 NUP43 NUP43 NUP107 NUP107 NUP155 NUP155 ENSEEUP00000003238 ENSEEUP00000003238 GEMIN6 GEMIN6 POM121C POM121C SNRPD1 SNRPD1 SNRPE SNRPE SEH1L SEH1L GEMIN4 GEMIN4 NUP42 NUP42 SNRPG SNRPG NUP88 NUP88 RANBP2 RANBP2 NUP93 NUP93 GEMIN2 GEMIN2 NUP35 NUP35 NUP58 NUP58 NUP153 NUP153 ENSEEUP00000009375 ENSEEUP00000009375 CLNS1A CLNS1A NUP133 NUP133 RAE1 RAE1 GEMIN5 GEMIN5 SNRPF SNRPF NUP98 NUP98 AAAS AAAS NUP205 NUP205 TPR TPR ENSEEUP00000013306 ENSEEUP00000013306 NUP188 NUP188 GEMIN8 GEMIN8 ENSEEUP00000014024 ENSEEUP00000014024 NUP210L NUP210L SNRPD3 SNRPD3 SNRPB SNRPB NUP85 NUP85 SMN1 SMN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUP50Nuclear pore complex protein Nup50. (467 aa)
NUP214Nuclear pore complex protein Nup214. (2063 aa)
DDX20Probable ATP-dependent RNA helicase DDX20. (483 aa)
ENSEEUP00000000875annotation not available (361 aa)
NUP210Nuclear pore membrane glycoprotein 210. (1716 aa)
NUP37Nucleoporin Nup37. (207 aa)
TGS1Trimethylguanosine synthase 1. (843 aa)
ENSEEUP00000001752annotation not available (65 aa)
NUP43Nucleoporin Nup43. (433 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (758 aa)
NUP155Nuclear pore complex protein Nup155 isoform X1. (1292 aa)
ENSEEUP00000003238annotation not available (505 aa)
GEMIN6Gem-associated protein 6. (167 aa)
POM121CNuclear envelope pore membrane protein POM 121C. (508 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (89 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (90 aa)
SEH1LSEH1 like nucleoporin. (365 aa)
GEMIN4Gem-associated protein 4. (1059 aa)
NUP42Nucleoporin-like protein 2. (412 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
NUP88Nuclear pore complex protein Nup88 isoform X1. (734 aa)
RANBP2E3 SUMO-protein ligase RanBP2 isoform X1. (3087 aa)
NUP93Nucleoporin 93. (819 aa)
GEMIN2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (278 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (324 aa)
NUP58Nucleoporin p58/p45 isoform X1. (561 aa)
NUP153LOW QUALITY PROTEIN: nuclear pore complex protein Nup153. (1429 aa)
ENSEEUP00000009375annotation not available (264 aa)
CLNS1AMethylosome subunit pICln. (214 aa)
NUP133LOW QUALITY PROTEIN: nuclear pore complex protein Nup133. (1010 aa)
RAE1mRNA export factor. (368 aa)
GEMIN5Gem-associated protein 5. (1436 aa)
SNRPFSmall nuclear ribonucleoprotein F. (85 aa)
NUP98Nuclear pore complex protein Nup98-Nup96 isoform X3. (1662 aa)
AAASAladin isoform X1. (547 aa)
NUP205Nucleoporin 205. (1959 aa)
TPRNucleoprotein TPR isoform X1. (2317 aa)
ENSEEUP00000013306annotation not available (670 aa)
NUP188Nucleoporin NUP188 homolog. (1737 aa)
GEMIN8Gem-associated protein 8. (308 aa)
ENSEEUP00000014024annotation not available (1411 aa)
NUP210LNuclear pore membrane glycoprotein 210-like. (1826 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (125 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein B; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes (By similarity). Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing (By similarity). (284 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
SMN1Survival motor neuron protein. (248 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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