STRINGSTRING
SPATA5L1 SPATA5L1 RNF8 RNF8 HELLS HELLS CNPPD1 CNPPD1 PRKDC PRKDC PRPF19 PRPF19 ERCC4 ERCC4 ATM ATM BRCC3 BRCC3 ENSEEUP00000007519 ENSEEUP00000007519 RAD1 RAD1 ENSEEUP00000007599 ENSEEUP00000007599 ENSEEUP00000007672 ENSEEUP00000007672 ENSEEUP00000007680 ENSEEUP00000007680 MRE11 MRE11 ALKBH2 ALKBH2 AQR AQR ENSEEUP00000003666 ENSEEUP00000003666 MDC1 MDC1 ENSEEUP00000003518 ENSEEUP00000003518 POLR2C POLR2C ABRAXAS1 ABRAXAS1 CHEK1 CHEK1 REV3L REV3L RHNO1 RHNO1 ENSEEUP00000003178 ENSEEUP00000003178 NUTF2 NUTF2 ENSEEUP00000002984 ENSEEUP00000002984 RNF169 RNF169 DDB1 DDB1 ENSEEUP00000002916 ENSEEUP00000002916 ENSEEUP00000002888 ENSEEUP00000002888 ENSEEUP00000002862 ENSEEUP00000002862 ENSEEUP00000002851 ENSEEUP00000002851 CHD1L CHD1L NTHL1 NTHL1 PCNA PCNA H2BC1 H2BC1 ENSEEUP00000002608 ENSEEUP00000002608 ENSEEUP00000002591 ENSEEUP00000002591 NPLOC4 NPLOC4 ENSEEUP00000002522 ENSEEUP00000002522 H2BC3 H2BC3 BRCA1 BRCA1 ENSEEUP00000002380 ENSEEUP00000002380 RHNO1-2 RHNO1-2 ENSEEUP00000002216 ENSEEUP00000002216 RPS27A RPS27A ENSEEUP00000002093 ENSEEUP00000002093 TIMELESS TIMELESS RAD51AP1 RAD51AP1 TDRD3 TDRD3 RPA1 RPA1 ALKBH3 ALKBH3 POLR2I POLR2I ANKRD12 ANKRD12 ACD ACD RBBP8 RBBP8 RAD51C RAD51C GTF2H5 GTF2H5 ABL1 ABL1 CCNA1 CCNA1 RAD51D RAD51D ENSEEUP00000001330 ENSEEUP00000001330 RAD51B RAD51B BLM BLM RAD23B RAD23B VWA5B2 VWA5B2 POLR2A POLR2A POLH POLH MNAT1 MNAT1 ENSEEUP00000000963 ENSEEUP00000000963 POLQ POLQ ERCC3 ERCC3 ENSEEUP00000000947 ENSEEUP00000000947 XRCC4 XRCC4 ENSEEUP00000000900 ENSEEUP00000000900 VCP VCP LOC103128582 LOC103128582 UIMC1 UIMC1 ENSEEUP00000000645 ENSEEUP00000000645 RAD50 RAD50 PARP3 PARP3 ANKRD11 ANKRD11 BABAM2 BABAM2 LOC103121078-2 LOC103121078-2 ENSEEUP00000000513 ENSEEUP00000000513 ENSEEUP00000000473 ENSEEUP00000000473 LOC103121073 LOC103121073 LOC103121078 LOC103121078 ENSEEUP00000000369 ENSEEUP00000000369 RAD18 RAD18 OGG1 OGG1 RCBTB2 RCBTB2 NEIL2 NEIL2 ENSEEUP00000011467 ENSEEUP00000011467 TCEANC2 TCEANC2 APEX1 APEX1 ENSEEUP00000011399 ENSEEUP00000011399 WDR76 WDR76 SPRTN SPRTN PARP1 PARP1 PROSER1 PROSER1 ENSEEUP00000011189 ENSEEUP00000011189 VTCN1 VTCN1 TOP3A TOP3A UBE2L6 UBE2L6 FANCE FANCE CDK3 CDK3 PARP2 PARP2 ENSEEUP00000011015 ENSEEUP00000011015 ENSEEUP00000010992 ENSEEUP00000010992 ATR ATR LOC103116073 LOC103116073 ENSEEUP00000010729 ENSEEUP00000010729 RPAP3 RPAP3 ENSEEUP00000010627 ENSEEUP00000010627 COPS7A COPS7A TDG TDG MBD4 MBD4 ENKD1 ENKD1 POLR2F POLR2F RMI1 RMI1 FANCI FANCI NEIL3 NEIL3 HUS1 HUS1 TDP2 TDP2 LOC103116283 LOC103116283 ALKBH5 ALKBH5 ERCC2 ERCC2 EME1 EME1 LIG3 LIG3 ENSEEUP00000009565 ENSEEUP00000009565 RNF111 RNF111 AKAP7 AKAP7 PPIE PPIE POLR2D POLR2D POLE4 POLE4 RNF168 RNF168 POLR2B POLR2B ASCC3 ASCC3 BRCA2 BRCA2 ENSEEUP00000008966 ENSEEUP00000008966 ENSEEUP00000008948 ENSEEUP00000008948 ENSEEUP00000008832 ENSEEUP00000008832 EP300 EP300 H2BC6 H2BC6 ENSEEUP00000008622 ENSEEUP00000008622 ENSEEUP00000008599 ENSEEUP00000008599 PHF3 PHF3 UFD1 UFD1 LOC103121073-3 LOC103121073-3 GTF2H3 GTF2H3 FANCL FANCL TCEA1 TCEA1 RFC3 RFC3 ENSEEUP00000008316 ENSEEUP00000008316 ENSEEUP00000008199 ENSEEUP00000008199 PIAS3 PIAS3 XRCC5 XRCC5 COPS5 COPS5 ENSEEUP00000004813 ENSEEUP00000004813 ENSEEUP00000004780 ENSEEUP00000004780 APBB2 APBB2 ENSEEUP00000004580 ENSEEUP00000004580 WRN WRN ENSEEUP00000004562 ENSEEUP00000004562 GEN1 GEN1 ENSEEUP00000004392 ENSEEUP00000004392 ENSEEUP00000004328 ENSEEUP00000004328 ZNF830 ZNF830 UBE2T UBE2T ASCC2 ASCC2 ERCC8 ERCC8 FANCC FANCC NBN NBN EYA4 EYA4 POLL POLL ENSEEUP00000014511 ENSEEUP00000014511 H2AZ2 H2AZ2 ENSEEUP00000014419 ENSEEUP00000014419 LOC103121078-5 LOC103121078-5 TCEA3 TCEA3 POLR2K POLR2K MSH2 MSH2 LOC103121078-4 LOC103121078-4 MUS81 MUS81 SLX4 SLX4 SLF1 SLF1 PIAS1 PIAS1 DNTT DNTT PALB2 PALB2 LIG1 LIG1 MUTYH MUTYH TRIM47 TRIM47 NSD2 NSD2 XPC XPC XRCC1 XRCC1 POLI POLI ENSEEUP00000013580 ENSEEUP00000013580 UBE2V2 UBE2V2 MEIOB MEIOB TP53 TP53 NEIL1 NEIL1 POLE2 POLE2 USP43 USP43 ENSEEUP00000013106 ENSEEUP00000013106 HMGN2 HMGN2 ENSEEUP00000013094 ENSEEUP00000013094 TRIM25 TRIM25 H2BU1 H2BU1 PMS2 PMS2 FANCD2 FANCD2 CDK2 CDK2 ENSEEUP00000012754 ENSEEUP00000012754 EYA2 EYA2 ENSEEUP00000012657 ENSEEUP00000012657 CUL4B CUL4B CCNA2 CCNA2 CDK7 CDK7 ENSEEUP00000012445 ENSEEUP00000012445 ENSEEUP00000012384 ENSEEUP00000012384 REV1 REV1 ENSEEUP00000012293 ENSEEUP00000012293 EYA3 EYA3 RFC5 RFC5 RIF1 RIF1 APEX2 APEX2 WBP1 WBP1 SUMO1 SUMO1 PMS1 PMS1 USP10 USP10 ENSEEUP00000011699 ENSEEUP00000011699 ERCC1 ERCC1 PPP4C PPP4C ENSEEUP00000011645 ENSEEUP00000011645 ATAD5 ATAD5 COPS4 COPS4 POLE3 POLE3 GTF2H1 GTF2H1 TERF1 TERF1 H2AC4 H2AC4 ENSEEUP00000008137 ENSEEUP00000008137 POLD3 POLD3 LOC103121078-3 LOC103121078-3 DNA2 DNA2 EXO1 EXO1 RFC4 RFC4 ENSEEUP00000007801 ENSEEUP00000007801 ERCC6 ERCC6 TMEM182 TMEM182 ENSEEUP00000004885 ENSEEUP00000004885 VWA5A VWA5A ENSEEUP00000004944 ENSEEUP00000004944 BARD1 BARD1 DCLRE1A DCLRE1A FANCM FANCM UBA7 UBA7 XPA XPA MAD2L2 MAD2L2 POLM POLM H2BC18 H2BC18 UBXN1 UBXN1 POLR2H POLR2H LOC103121073-2 LOC103121073-2 MSH6 MSH6 LOC103123915 LOC103123915 USP31 USP31 ENSEEUP00000005701 ENSEEUP00000005701 POLD2 POLD2 FAN1 FAN1 RAD52 RAD52 SPIDR SPIDR CETN3 CETN3 XRCC3 XRCC3 TDP1 TDP1 WDR48 WDR48 PARG PARG USP1 USP1 EXD2 EXD2 FAAP20 FAAP20 TOPBP1 TOPBP1 ENSEEUP00000006554 ENSEEUP00000006554 ENSEEUP00000006572 ENSEEUP00000006572 ENSEEUP00000006577 ENSEEUP00000006577 BAP1 BAP1 ADPRHL2 ADPRHL2 KPNA7 KPNA7 POLR2G POLR2G ENSEEUP00000006794 ENSEEUP00000006794 ENSEEUP00000006810 ENSEEUP00000006810
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPATA5L1Spermatogenesis associated 5 like 1. (752 aa)
RNF8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (451 aa)
HELLSLymphoid-specific helicase isoform X1. (793 aa)
CNPPD1Protein CNPPD1. (241 aa)
PRKDCDNA-dependent protein kinase catalytic subunit. (4126 aa)
PRPF19pre-mRNA-processing factor 19. (504 aa)
ERCC4DNA repair endonuclease XPF. (918 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3041 aa)
BRCC3Lys-63-specific deubiquitinase BRCC36. (277 aa)
ENSEEUP00000007519annotation not available (1139 aa)
RAD1Cell cycle checkpoint protein RAD1. (281 aa)
ENSEEUP00000007599annotation not available (317 aa)
ENSEEUP00000007672annotation not available (902 aa)
ENSEEUP00000007680annotation not available (700 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (656 aa)
ALKBH2DNA oxidative demethylase ALKBH2 isoform X1. (260 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1517 aa)
ENSEEUP00000003666annotation not available (1131 aa)
MDC1Mediator of DNA damage checkpoint protein 1 isoform X1. (1523 aa)
ENSEEUP00000003518annotation not available (658 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (275 aa)
ABRAXAS1Helicase POLQ-like isoform X5. (410 aa)
CHEK1Serine/threonine-protein kinase Chk1 isoform X1; Belongs to the protein kinase superfamily. (476 aa)
REV3LDNA polymerase zeta catalytic subunit. (3075 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (229 aa)
ENSEEUP00000003178annotation not available (555 aa)
NUTF2Nuclear transport factor 2. (127 aa)
ENSEEUP00000002984annotation not available (425 aa)
RNF169E3 ubiquitin-protein ligase RNF169. (709 aa)
DDB1DNA damage-binding protein 1. (1138 aa)
ENSEEUP00000002916annotation not available (218 aa)
ENSEEUP00000002888annotation not available (222 aa)
ENSEEUP00000002862annotation not available (684 aa)
ENSEEUP00000002851annotation not available (426 aa)
CHD1Lchromodomain-helicase-DNA-binding protein 1-like isoform X1. (873 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (302 aa)
PCNAProliferating cell nuclear antigen. (259 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
ENSEEUP00000002608annotation not available (86 aa)
ENSEEUP00000002591annotation not available (102 aa)
NPLOC4Nuclear protein localization protein 4 homolog isoform X2. (539 aa)
ENSEEUP00000002522annotation not available (706 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
BRCA1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1812 aa)
ENSEEUP00000002380annotation not available (1195 aa)
RHNO1-2RAD9, HUS1, RAD1-interacting nuclear orphan protein 1. (133 aa)
ENSEEUP00000002216annotation not available (543 aa)
RPS27Aubiquitin-40S ribosomal protein S27a. (102 aa)
ENSEEUP00000002093annotation not available (1887 aa)
TIMELESSTimeless circadian regulator. (1214 aa)
RAD51AP1RAD51-associated protein 1 isoform X1. (201 aa)
TDRD3Tudor domain-containing protein 3. (650 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
ALKBH3Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 isoform X1. (287 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
ANKRD12Ankyrin repeat domain-containing protein 12 isoform X1. (1978 aa)
ACDAdrenocortical dysplasia protein homolog isoform X1. (528 aa)
RBBP8DNA endonuclease RBBP8. (903 aa)
RAD51CDNA repair protein RAD51 homolog 3. (377 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
ABL1Tyrosine-protein kinase. (925 aa)
CCNA1cyclin-A1; Belongs to the cyclin family. (413 aa)
RAD51DDNA repair protein RAD51 homolog 4 isoform X1. (327 aa)
ENSEEUP00000001330annotation not available (782 aa)
RAD51BDNA repair protein RAD51 homolog 2. (344 aa)
BLMBloom syndrome protein. (1383 aa)
RAD23BUV excision repair protein RAD23 homolog B. (360 aa)
VWA5B2Von Willebrand factor A domain-containing protein 5B2. (969 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1637 aa)
POLHDNA polymerase eta. (704 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (269 aa)
ENSEEUP00000000963annotation not available (618 aa)
POLQDNA polymerase theta. (2561 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit isoform X1. (733 aa)
ENSEEUP00000000947annotation not available (531 aa)
XRCC4DNA repair protein XRCC4. (332 aa)
ENSEEUP00000000900annotation not available (548 aa)
VCPValosin containing protein. (806 aa)
LOC103128582Fanconi anemia core complex-associated protein 24-like. (216 aa)
UIMC1BRCA1-A complex subunit RAP80 isoform X1. (671 aa)
ENSEEUP00000000645annotation not available (588 aa)
RAD50DNA repair protein RAD50 isoform X1. (1311 aa)
PARP3Poly [ADP-ribose] polymerase. (536 aa)
ANKRD11Ankyrin repeat domain-containing protein 11 isoform X1. (2533 aa)
BABAM2BRCA1-A complex subunit BRE. (370 aa)
LOC103121078-2Histone H4. (103 aa)
ENSEEUP00000000513annotation not available (566 aa)
ENSEEUP00000000473annotation not available (423 aa)
LOC103121073Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103121078Uncharacterized protein LOC103123889 isoform X1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ENSEEUP00000000369annotation not available (121 aa)
RAD18E3 ubiquitin-protein ligase RAD18. (440 aa)
OGG1N-glycosylase/DNA lyase. (383 aa)
RCBTB2RCC1 and BTB domain-containing protein 2 isoform X1. (537 aa)
NEIL2Endonuclease 8-like 2. (284 aa)
ENSEEUP00000011467annotation not available (851 aa)
TCEANC2Transcription elongation factor A N-terminal and central domain-containing protein 2. (237 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (288 aa)
ENSEEUP00000011399annotation not available (197 aa)
WDR76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (604 aa)
SPRTNsprT-like domain-containing protein Spartan. (481 aa)
PARP1Poly [ADP-ribose] polymerase. (1016 aa)
PROSER1Proline and serine-rich protein 1. (936 aa)
ENSEEUP00000011189annotation not available (1002 aa)
VTCN1V-set domain-containing T-cell activation inhibitor 1. (271 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (943 aa)
UBE2L6ubiquitin/ISG15-conjugating enzyme E2 L6. (94 aa)
FANCEFanconi anemia group E protein. (503 aa)
CDK3Cyclin-dependent kinase 3 isoform X1; Belongs to the protein kinase superfamily. (304 aa)
PARP2Poly [ADP-ribose] polymerase. (580 aa)
ENSEEUP00000011015annotation not available (69 aa)
ENSEEUP00000010992annotation not available (59 aa)
ATRSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2572 aa)
LOC103116073Histone H2B; Belongs to the histone H2B family. (121 aa)
ENSEEUP00000010729annotation not available (447 aa)
RPAP3RNA polymerase II-associated protein 3 isoform X1. (608 aa)
ENSEEUP00000010627annotation not available (1121 aa)
COPS7ACOP9 signalosome complex subunit 7a. (272 aa)
TDGG/T mismatch-specific thymine DNA glycosylase isoform X1. (363 aa)
MBD4Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. (539 aa)
ENKD1Enkurin domain-containing protein 1. (305 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (125 aa)
RMI1recQ-mediated genome instability protein 1. (608 aa)
FANCIFanconi anemia group I protein isoform X2. (1228 aa)
NEIL3Endonuclease 8-like 3. (453 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (279 aa)
TDP2tyrosyl-DNA phosphodiesterase 2. (356 aa)
LOC103116283General transcription factor IIH subunit 3-like isoform X2. (217 aa)
ALKBH5RNA demethylase ALKBH5 isoform X1. (448 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit. (729 aa)
EME1Crossover junction endonuclease EME1 isoform X1. (563 aa)
LIG3DNA ligase. (708 aa)
ENSEEUP00000009565annotation not available (605 aa)
RNF111E3 ubiquitin-protein ligase Arkadia isoform X3. (869 aa)
AKAP7A-kinase anchoring protein 7. (326 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (279 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (84 aa)
POLE4DNA polymerase epsilon subunit 4. (97 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (348 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1173 aa)
ASCC3Activating signal cointegrator 1 complex subunit 3. (1933 aa)
BRCA2Breast cancer type 2 susceptibility protein. (3345 aa)
ENSEEUP00000008966annotation not available (111 aa)
ENSEEUP00000008948annotation not available (167 aa)
ENSEEUP00000008832annotation not available (514 aa)
EP300Histone acetyltransferase p300. (1983 aa)
H2BC6Histone H2B type 1. (126 aa)
ENSEEUP00000008622annotation not available (935 aa)
ENSEEUP00000008599annotation not available (323 aa)
PHF3PHD finger protein 3 isoform X1. (2032 aa)
UFD1Ubiquitin recognition factor in ER associated degradation 1. (306 aa)
LOC103121073-3Histone H2B type 1. (126 aa)
GTF2H3General transcription factor IIH subunit 3. (304 aa)
FANCLE3 ubiquitin-protein ligase FANCL. (372 aa)
TCEA1Transcription elongation factor A protein 1 isoform X1. (115 aa)
RFC3Replication factor C subunit 3. (353 aa)
ENSEEUP00000008316annotation not available (453 aa)
ENSEEUP00000008199annotation not available (261 aa)
PIAS3E3 SUMO-protein ligase PIAS3 isoform X2. (405 aa)
XRCC5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (625 aa)
COPS5COP9 signalosome complex subunit 5 isoform X1. (334 aa)
ENSEEUP00000004813annotation not available (1112 aa)
ENSEEUP00000004780annotation not available (1060 aa)
APBB2Amyloid beta A4 precursor protein-binding family B member 2 isoform X1. (640 aa)
ENSEEUP00000004580annotation not available (624 aa)
WRNLOW QUALITY PROTEIN: Werner syndrome ATP-dependent helicase. (1264 aa)
ENSEEUP00000004562annotation not available (359 aa)
GEN1Flap endonuclease GEN homolog 1. (871 aa)
ENSEEUP00000004392annotation not available (410 aa)
ENSEEUP00000004328annotation not available (126 aa)
ZNF830Zinc finger protein 830. (361 aa)
UBE2TUbiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (137 aa)
ASCC2Activating signal cointegrator 1 complex subunit 2. (721 aa)
ERCC8DNA excision repair protein ERCC-8. (395 aa)
FANCCFanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1. (509 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (753 aa)
EYA4Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (637 aa)
POLLDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (383 aa)
ENSEEUP00000014511annotation not available (150 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (134 aa)
ENSEEUP00000014419annotation not available (65 aa)
LOC103121078-5Histone H4. (103 aa)
TCEA3Transcription elongation factor A protein 3. (326 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (51 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (932 aa)
LOC103121078-4Histone H4. (103 aa)
MUS81Crossover junction endonuclease MUS81 isoform X3. (464 aa)
SLX4Structure-specific endonuclease subunit SLX4. (1553 aa)
SLF1LOW QUALITY PROTEIN: SMC5-SMC6 complex localization factor protein 1. (1057 aa)
PIAS1E3 SUMO-protein ligase PIAS1. (397 aa)
DNTTDNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (512 aa)
PALB2Partner and localizer of BRCA2 isoform X2. (1173 aa)
LIG1DNA ligase 1. (919 aa)
MUTYHAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (549 aa)
TRIM47Tripartite motif-containing protein 47 isoform X2. (413 aa)
NSD2Nuclear receptor binding SET domain protein 2. (1365 aa)
XPCDNA repair protein complementing XP-C cells. (912 aa)
XRCC1DNA repair protein XRCC1 isoform X2. (631 aa)
POLIDNA polymerase iota. (383 aa)
ENSEEUP00000013580annotation not available (346 aa)
UBE2V2Ubiquitin conjugating enzyme E2 V2. (144 aa)
MEIOBMeiosis-specific with OB domain-containing protein. (214 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (375 aa)
NEIL1Endonuclease 8-like 1. (389 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (516 aa)
USP43Ubiquitin carboxyl-terminal hydrolase 43 isoform X1; Belongs to the peptidase C19 family. (1070 aa)
ENSEEUP00000013106annotation not available (498 aa)
HMGN2Non-histone chromosomal protein HMG-17. (90 aa)
ENSEEUP00000013094annotation not available (560 aa)
TRIM25E3 ubiquitin/ISG15 ligase TRIM25. (635 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
PMS2Mismatch repair endonuclease PMS2. (845 aa)
FANCD2Fanconi anemia group D2 protein. (1462 aa)
CDK2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
ENSEEUP00000012754annotation not available (247 aa)
EYA2EYA transcriptional coactivator and phosphatase 2. (538 aa)
ENSEEUP00000012657annotation not available (1204 aa)
CUL4Bcullin-4B isoform X1; Belongs to the cullin family. (893 aa)
CCNA2cyclin-A2; Belongs to the cyclin family. (256 aa)
CDK7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (246 aa)
ENSEEUP00000012445annotation not available (336 aa)
ENSEEUP00000012384annotation not available (4615 aa)
REV1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1011 aa)
ENSEEUP00000012293annotation not available (133 aa)
EYA3Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (568 aa)
RFC5Replication factor C subunit 5. (304 aa)
RIF1Replication timing regulatory factor 1. (2367 aa)
APEX2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (509 aa)
WBP1WW domain-binding protein 1 isoform X1. (268 aa)
SUMO1Small ubiquitin-related modifier. (101 aa)
PMS1PMS1 protein homolog 1 isoform X6. (931 aa)
USP10Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (800 aa)
ENSEEUP00000011699annotation not available (481 aa)
ERCC1DNA excision repair protein ERCC-1 isoform X2. (232 aa)
PPP4CSerine/threonine-protein phosphatase. (307 aa)
ENSEEUP00000011645annotation not available (1440 aa)
ATAD5ATPase family AAA domain containing 5. (1813 aa)
COPS4COP9 signalosome complex subunit 4 isoform X1. (380 aa)
POLE3DNA polymerase epsilon subunit 3. (147 aa)
GTF2H1General transcription factor IIH subunit 1 isoform X1. (424 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (433 aa)
H2AC4Histone H2A; Belongs to the histone H2A family. (130 aa)
ENSEEUP00000008137annotation not available (338 aa)
POLD3DNA polymerase delta subunit 3. (404 aa)
LOC103121078-3Histone H4. (103 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (924 aa)
EXO1Exonuclease 1. (772 aa)
RFC4Replication factor C subunit 4. (363 aa)
ENSEEUP00000007801annotation not available (115 aa)
ERCC6DNA excision repair protein ERCC-6. (1468 aa)
TMEM182Transmembrane protein 182. (229 aa)
ENSEEUP00000004885annotation not available (315 aa)
VWA5AVon Willebrand factor A domain-containing protein 5A. (734 aa)
ENSEEUP00000004944annotation not available (389 aa)
BARD1BRCA1-associated RING domain protein 1. (611 aa)
DCLRE1ADNA cross-link repair 1A protein. (1003 aa)
FANCMFanconi anemia group M protein. (1962 aa)
UBA7Ubiquitin-like modifier-activating enzyme 7 isoform X2. (810 aa)
XPADNA repair protein complementing XP-A cells. (214 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B. (216 aa)
POLMDNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (486 aa)
H2BC18Histone H2B; Belongs to the histone H2B family. (126 aa)
UBXN1UBX domain-containing protein 1 isoform X1. (313 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (83 aa)
LOC103121073-2Histone H2B type 1. (126 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1139 aa)
LOC103123915Histone H2B; Belongs to the histone H2B family. (126 aa)
USP31Ubiquitin carboxyl-terminal hydrolase 31; Belongs to the peptidase C19 family. (1135 aa)
ENSEEUP00000005701annotation not available (1146 aa)
POLD2DNA polymerase delta subunit 2. (466 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1007 aa)
RAD52DNA repair protein RAD52 homolog isoform X1. (391 aa)
SPIDRDNA repair-scaffolding protein. (892 aa)
CETN3Centrin-3 isoform X1. (166 aa)
XRCC3DNA repair protein XRCC3 isoform X2. (254 aa)
TDP1tyrosyl-DNA phosphodiesterase 1. (610 aa)
WDR48WD repeat-containing protein 48 isoform X1. (651 aa)
PARGpoly(ADP-ribose) glycohydrolase isoform X2. (195 aa)
USP1Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (726 aa)
EXD2Exonuclease 3'-5' domain-containing protein 2. (496 aa)
FAAP20Fanconi anemia core complex-associated protein 20. (153 aa)
TOPBP1DNA topoisomerase 2-binding protein 1 isoform X1. (1452 aa)
ENSEEUP00000006554annotation not available (397 aa)
ENSEEUP00000006572annotation not available (1974 aa)
ENSEEUP00000006577annotation not available (598 aa)
BAP1Ubiquitin carboxyl-terminal hydrolase. (576 aa)
ADPRHL2poly(ADP-ribose) glycohydrolase ARH3. (363 aa)
KPNA7Importin subunit alpha-8. (356 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
ENSEEUP00000006794annotation not available (388 aa)
ENSEEUP00000006810annotation not available (80 aa)
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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