(13 nodes) RNA Polymerase II Promoter Escape network (Echinops telfairi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GTF2F2	General transcription factor IIF subunit 2. (250 aa)
	ENSETEP00000003218	annotation not available (389 aa)
	GTF2A2	General transcription factor IIA subunit 2. (85 aa)
	ERCC2	ERCC excision repair 2, TFIIH core complex helicase subunit. (729 aa)
	GTF2H3	General transcription factor IIH subunit 3. (201 aa)
	GTF2A1	General transcription factor IIA subunit 1. (363 aa)
	GTF2H1	General transcription factor IIH subunit 1. (548 aa)
	GTF2E1	General transcription factor IIE subunit 1. (437 aa)
	ENSETEP00000008738	annotation not available (309 aa)
	POLR2B	RNA polymerase II subunit B. (1165 aa)
	GTF2E2	General transcription factor IIE subunit 2. (291 aa)
	GTF2B	General transcription factor IIB. (265 aa)
	GTF2F1	General transcription factor IIF subunit 1. (516 aa)

Your Current Organism:

Echinops telfairi

NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSETEP00000003218	ENSETEP00000008738	ENSETEP00000003218	ENSETEP00000008738	annotation not available	annotation not available	0.999
ENSETEP00000003218	ERCC2	ENSETEP00000003218	ENSETEP00000003705	annotation not available	ERCC excision repair 2, TFIIH core complex helicase subunit.	0.999
ENSETEP00000003218	GTF2A1	ENSETEP00000003218	ENSETEP00000004986	annotation not available	General transcription factor IIA subunit 1.	0.993
ENSETEP00000003218	GTF2A2	ENSETEP00000003218	ENSETEP00000003460	annotation not available	General transcription factor IIA subunit 2.	0.994
ENSETEP00000003218	GTF2B	ENSETEP00000003218	ENSETEP00000015484	annotation not available	General transcription factor IIB.	0.994
ENSETEP00000003218	GTF2E1	ENSETEP00000003218	ENSETEP00000008290	annotation not available	General transcription factor IIE subunit 1.	0.998
ENSETEP00000003218	GTF2E2	ENSETEP00000003218	ENSETEP00000009937	annotation not available	General transcription factor IIE subunit 2.	0.998
ENSETEP00000003218	GTF2F1	ENSETEP00000003218	ENSETEP00000015709	annotation not available	General transcription factor IIF subunit 1.	0.992
ENSETEP00000003218	GTF2F2	ENSETEP00000003218	ENSETEP00000000057	annotation not available	General transcription factor IIF subunit 2.	0.990
ENSETEP00000003218	GTF2H1	ENSETEP00000003218	ENSETEP00000005182	annotation not available	General transcription factor IIH subunit 1.	0.999
ENSETEP00000003218	GTF2H3	ENSETEP00000003218	ENSETEP00000004859	annotation not available	General transcription factor IIH subunit 3.	0.999
ENSETEP00000003218	POLR2B	ENSETEP00000003218	ENSETEP00000009522	annotation not available	RNA polymerase II subunit B.	0.991
ENSETEP00000008738	ENSETEP00000003218	ENSETEP00000008738	ENSETEP00000003218	annotation not available	annotation not available	0.999
ENSETEP00000008738	ERCC2	ENSETEP00000008738	ENSETEP00000003705	annotation not available	ERCC excision repair 2, TFIIH core complex helicase subunit.	0.999
ENSETEP00000008738	GTF2A1	ENSETEP00000008738	ENSETEP00000004986	annotation not available	General transcription factor IIA subunit 1.	0.989
ENSETEP00000008738	GTF2A2	ENSETEP00000008738	ENSETEP00000003460	annotation not available	General transcription factor IIA subunit 2.	0.990
ENSETEP00000008738	GTF2B	ENSETEP00000008738	ENSETEP00000015484	annotation not available	General transcription factor IIB.	0.994
ENSETEP00000008738	GTF2E1	ENSETEP00000008738	ENSETEP00000008290	annotation not available	General transcription factor IIE subunit 1.	0.998
ENSETEP00000008738	GTF2E2	ENSETEP00000008738	ENSETEP00000009937	annotation not available	General transcription factor IIE subunit 2.	0.999
ENSETEP00000008738	GTF2F1	ENSETEP00000008738	ENSETEP00000015709	annotation not available	General transcription factor IIF subunit 1.	0.991