STRINGSTRING
RTF1 RTF1 TAF13 TAF13 LEO1 LEO1 ENSETEP00000003218 ENSETEP00000003218 POLR2C POLR2C GTF2A2 GTF2A2 ENSETEP00000003470 ENSETEP00000003470 WDR61 WDR61 ERCC2 ERCC2 SUPT3H SUPT3H ENSETEP00000004410 ENSETEP00000004410 TAF5 TAF5 GTF2H3 GTF2H3 GTF2A1 GTF2A1 GTF2H1 GTF2H1 TRRAP TRRAP ENSETEP00000005432 ENSETEP00000005432 ENSETEP00000005859 ENSETEP00000005859 RPRD2 RPRD2 TAF10 TAF10 GTF2E1 GTF2E1 ENSETEP00000008467 ENSETEP00000008467 TADA3 TADA3 ENSETEP00000008738 ENSETEP00000008738 MYO6 MYO6 ENSETEP00000009453 ENSETEP00000009453 POLR2B POLR2B RPRD1B RPRD1B GTF2E2 GTF2E2 RPAP2 RPAP2 POLR2L POLR2L TAF12 TAF12 POLR2I POLR2I GTF2H5 GTF2H5 ENSETEP00000011271 ENSETEP00000011271 ENSETEP00000011317 ENSETEP00000011317 TAF9 TAF9 ENSETEP00000015362 ENSETEP00000015362 GTF2B GTF2B GTF2F1 GTF2F1 CDK7 CDK7 POLR2G POLR2G ERCC3 ERCC3 ENSETEP00000014664 ENSETEP00000014664 CDC73 CDC73 CTR9 CTR9 TAF5L TAF5L TAF6L TAF6L TBPL1 TBPL1 TAF8 TAF8 TAF4B TAF4B GTF2F2 GTF2F2 PAF1 PAF1 TAF2 TAF2 ENSETEP00000001414 ENSETEP00000001414 ENSETEP00000002073 ENSETEP00000002073
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (574 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (673 aa)
ENSETEP00000003218annotation not available (389 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
GTF2A2General transcription factor IIA subunit 2. (85 aa)
ENSETEP00000003470annotation not available (150 aa)
WDR61WD repeat domain 61. (302 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (729 aa)
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (328 aa)
ENSETEP00000004410annotation not available (294 aa)
TAF5TATA-box binding protein associated factor 5. (802 aa)
GTF2H3General transcription factor IIH subunit 3. (201 aa)
GTF2A1General transcription factor IIA subunit 1. (363 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
TRRAPTransformation/transcription domain associated protein. (3846 aa)
ENSETEP00000005432annotation not available (543 aa)
ENSETEP00000005859annotation not available (1883 aa)
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1388 aa)
TAF10TATA-box binding protein associated factor 10. (218 aa)
GTF2E1General transcription factor IIE subunit 1. (437 aa)
ENSETEP00000008467annotation not available (733 aa)
TADA3Transcriptional adaptor 3. (362 aa)
ENSETEP00000008738annotation not available (309 aa)
MYO6Myosin VI. (1217 aa)
ENSETEP00000009453annotation not available (1173 aa)
POLR2BRNA polymerase II subunit B. (1165 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
GTF2E2General transcription factor IIE subunit 2. (291 aa)
RPAP2RNA polymerase II associated protein 2. (588 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
TAF12TATA-box binding protein associated factor 12. (161 aa)
POLR2IRNA polymerase II subunit I. (125 aa)
GTF2H5General transcription factor IIH subunit 5. (59 aa)
ENSETEP00000011271annotation not available (211 aa)
ENSETEP00000011317annotation not available (283 aa)
TAF9TATA-box binding protein associated factor 9. (257 aa)
ENSETEP00000015362annotation not available (142 aa)
GTF2BGeneral transcription factor IIB. (265 aa)
GTF2F1General transcription factor IIF subunit 1. (516 aa)
CDK7Cyclin dependent kinase 7. (346 aa)
POLR2GRNA polymerase II subunit G. (169 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (784 aa)
ENSETEP00000014664annotation not available (320 aa)
CDC73Cell division cycle 73. (529 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1194 aa)
TAF5LTATA-box binding protein associated factor 5 like. (589 aa)
TAF6LTATA-box binding protein associated factor 6 like. (548 aa)
TBPL1TATA-box binding protein like 1. (109 aa)
TAF8TATA-box binding protein associated factor 8. (311 aa)
TAF4BTATA-box binding protein associated factor 4b. (791 aa)
GTF2F2General transcription factor IIF subunit 2. (250 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (527 aa)
TAF2TATA-box binding protein associated factor 2. (1199 aa)
ENSETEP00000001414annotation not available (651 aa)
ENSETEP00000002073annotation not available (1893 aa)
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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