STRINGSTRING
TAF9 TAF9 GTF2F2 GTF2F2 PAF1 PAF1 TAF2 TAF2 ENSETEP00000001414 ENSETEP00000001414 LEO1 LEO1 ENSETEP00000003218 ENSETEP00000003218 GTF2A2 GTF2A2 WDR61 WDR61 SUPT3H SUPT3H ENSETEP00000004410 ENSETEP00000004410 TAF5 TAF5 GTF2H3 GTF2H3 GTF2A1 GTF2A1 GTF2H1 GTF2H1 ENSETEP00000005432 ENSETEP00000005432 SH3BP5L SH3BP5L ENSETEP00000005859 ENSETEP00000005859 RPRD2 RPRD2 WDR47 WDR47 GTF2E1 GTF2E1 ENSETEP00000008467 ENSETEP00000008467 ENSETEP00000008738 ENSETEP00000008738 TAF4B TAF4B ENSETEP00000009453 ENSETEP00000009453 RPRD1B RPRD1B GTF2E2 GTF2E2 RPAP2 RPAP2 POLR2L POLR2L TAF12 TAF12 POLR2I POLR2I GTF2H5 GTF2H5 ENSETEP00000011271 ENSETEP00000011271 ENSETEP00000011317 ENSETEP00000011317 TAF8 TAF8 TAF5L TAF5L CTR9 CTR9 CDC73 CDC73 GTF2F1 GTF2F1 CINP CINP CDK7 CDK7 POLR2G POLR2G ERCC3 ERCC3 TAF13 TAF13 RTF1 RTF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TAF9TATA-box binding protein associated factor 9. (257 aa)
GTF2F2General transcription factor IIF subunit 2. (250 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (527 aa)
TAF2TATA-box binding protein associated factor 2. (1199 aa)
ENSETEP00000001414annotation not available (651 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (673 aa)
ENSETEP00000003218annotation not available (389 aa)
GTF2A2General transcription factor IIA subunit 2. (85 aa)
WDR61WD repeat domain 61. (302 aa)
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (328 aa)
ENSETEP00000004410annotation not available (294 aa)
TAF5TATA-box binding protein associated factor 5. (802 aa)
GTF2H3General transcription factor IIH subunit 3. (201 aa)
GTF2A1General transcription factor IIA subunit 1. (363 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
ENSETEP00000005432annotation not available (543 aa)
SH3BP5LSH3 binding domain protein 5 like. (391 aa)
ENSETEP00000005859annotation not available (1883 aa)
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1388 aa)
WDR47WD repeat domain 47. (857 aa)
GTF2E1General transcription factor IIE subunit 1. (437 aa)
ENSETEP00000008467annotation not available (733 aa)
ENSETEP00000008738annotation not available (309 aa)
TAF4BTATA-box binding protein associated factor 4b. (791 aa)
ENSETEP00000009453annotation not available (1173 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
GTF2E2General transcription factor IIE subunit 2. (291 aa)
RPAP2RNA polymerase II associated protein 2. (588 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
TAF12TATA-box binding protein associated factor 12. (161 aa)
POLR2IRNA polymerase II subunit I. (125 aa)
GTF2H5General transcription factor IIH subunit 5. (59 aa)
ENSETEP00000011271annotation not available (211 aa)
ENSETEP00000011317annotation not available (283 aa)
TAF8TATA-box binding protein associated factor 8. (311 aa)
TAF5LTATA-box binding protein associated factor 5 like. (589 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1194 aa)
CDC73Cell division cycle 73. (529 aa)
GTF2F1General transcription factor IIF subunit 1. (516 aa)
CINPCyclin dependent kinase 2 interacting protein. (211 aa)
CDK7Cyclin dependent kinase 7. (346 aa)
POLR2GRNA polymerase II subunit G. (169 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (784 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (574 aa)
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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