STRINGSTRING
MAP1LC3B MAP1LC3B L5JNT3_PTEAL L5JNT3_PTEAL L5JQ22_PTEAL L5JQ22_PTEAL GABARAP GABARAP SQSTM1 SQSTM1 MAP1LC3A MAP1LC3A ATG16L2 ATG16L2 FUNDC1 FUNDC1 ATG7 ATG7 ATG10 ATG10 WIPI1 WIPI1 L5KSP5_PTEAL L5KSP5_PTEAL GABARAPL2 GABARAPL2 ATG16L1 ATG16L1 GABARAPL1 GABARAPL1 ATG4D ATG4D L5L405_PTEAL L5L405_PTEAL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MAP1LC3BMicrotubule-associated proteins 1A/1B light chain 3B. (125 aa)
L5JNT3_PTEALAutophagy protein 5; Involved in autophagic vesicle formation. (216 aa)
L5JQ22_PTEALNext to BRCA1 protein 1 protein. (880 aa)
GABARAPGamma-aminobutyric acid receptor-associated protein. (117 aa)
SQSTM1Sequestosome-1. (64 aa)
MAP1LC3AMicrotubule-associated proteins 1A/1B light chain 3A. (121 aa)
ATG16L2Autophagy-related protein 16-2. (622 aa)
FUNDC1FUN14 domain-containing protein 1. (155 aa)
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (743 aa)
ATG10Autophagy-related protein 10. (242 aa)
WIPI1WD repeat domain phosphoinositide-interacting protein 1. (437 aa)
L5KSP5_PTEALCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (431 aa)
GABARAPL2Gamma-aminobutyric acid receptor-associated protein-like 2. (117 aa)
ATG16L1Autophagy-related protein 16-1. (608 aa)
GABARAPL1Gamma-aminobutyric acid receptor-associated protein-like 1. (117 aa)
ATG4DCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (442 aa)
L5L405_PTEALAutophagy-related protein 3. (336 aa)
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox
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