21 items (Pteropus alecto) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARFIP2	Arfaptin-2. (341 aa)
	MAP1LC3B	Microtubule-associated proteins 1A/1B light chain 3B. (125 aa)
	BECN1	Beclin-1. (470 aa)
	TIGAR	Putative fructose-2,6-bisphosphatase TIGAR. (347 aa)
	SPATA33	Uncharacterized protein. (99 aa)
	PINK1	Serine/threonine-protein kinase PINK1, mitochondrial. (453 aa)
	GBA	Glucosylceramidase. (536 aa)
	SQSTM1	Sequestosome-1. (64 aa)
	MAP1LC3A	Microtubule-associated proteins 1A/1B light chain 3A. (121 aa)
	TP53	Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (378 aa)
	CUNH5orf51	Uncharacterized protein. (294 aa)
	ATG14	Uncharacterized protein. (505 aa)
	L5KF67_PTEAL	E3 ubiquitin-protein ligase parkin. (131 aa)
	PHB2	Prohibitin. (278 aa)
	PRKN	RBR-type E3 ubiquitin transferase. (128 aa)
	L5KSP5_PTEAL	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (431 aa)
	L5KX86_PTEAL	Activating molecule in BECN1-regulated autophagy protein 1. (1209 aa)
	OGT	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit. (1046 aa)
	L5KY23_PTEAL	Autophagy-related protein 13. (545 aa)
	L5L197_PTEAL	Protein FAM134B. (389 aa)
	ATG4D	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (442 aa)

Your Current Organism:

Pteropus alecto

NCBI taxonomy Id: 9402
Other names: P. alecto, black flying fox

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG14	BECN1	L5K434	L5JRT6	Uncharacterized protein.	Beclin-1.	0.999
ATG14	L5KSP5_PTEAL	L5K434	L5KSP5	Uncharacterized protein.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.557
ATG14	L5KX86_PTEAL	L5K434	L5KX86	Uncharacterized protein.	Activating molecule in BECN1-regulated autophagy protein 1.	0.923
ATG14	L5KY23_PTEAL	L5K434	L5KY23	Uncharacterized protein.	Autophagy-related protein 13.	0.894
ATG14	MAP1LC3A	L5K434	L5JYG9	Uncharacterized protein.	Microtubule-associated proteins 1A/1B light chain 3A.	0.696
ATG14	MAP1LC3B	L5K434	L5JM55	Uncharacterized protein.	Microtubule-associated proteins 1A/1B light chain 3B.	0.696
ATG14	SQSTM1	L5K434	L5JY72	Uncharacterized protein.	Sequestosome-1.	0.504
ATG4D	BECN1	L5L278	L5JRT6	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Beclin-1.	0.544
ATG4D	L5KSP5_PTEAL	L5L278	L5KSP5	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.416
ATG4D	L5KX86_PTEAL	L5L278	L5KX86	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Activating molecule in BECN1-regulated autophagy protein 1.	0.418
ATG4D	MAP1LC3A	L5L278	L5JYG9	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Microtubule-associated proteins 1A/1B light chain 3A.	0.747
ATG4D	MAP1LC3B	L5L278	L5JM55	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Microtubule-associated proteins 1A/1B light chain 3B.	0.747
BECN1	ATG14	L5JRT6	L5K434	Beclin-1.	Uncharacterized protein.	0.999
BECN1	ATG4D	L5JRT6	L5L278	Beclin-1.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.544
BECN1	L5KF67_PTEAL	L5JRT6	L5KF67	Beclin-1.	E3 ubiquitin-protein ligase parkin.	0.772
BECN1	L5KSP5_PTEAL	L5JRT6	L5KSP5	Beclin-1.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.644
BECN1	L5KX86_PTEAL	L5JRT6	L5KX86	Beclin-1.	Activating molecule in BECN1-regulated autophagy protein 1.	0.992
BECN1	L5KY23_PTEAL	L5JRT6	L5KY23	Beclin-1.	Autophagy-related protein 13.	0.886
BECN1	MAP1LC3A	L5JRT6	L5JYG9	Beclin-1.	Microtubule-associated proteins 1A/1B light chain 3A.	0.738
BECN1	MAP1LC3B	L5JRT6	L5JM55	Beclin-1.	Microtubule-associated proteins 1A/1B light chain 3B.	0.738